RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ATAD3BQ5T9A4 648 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 RSBN1Q5VWQ0 802 aaPredicted RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 EEF1DP3Q658K8 133 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 MPZL3Q6UWV2 235 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 LYSMD3Q7Z3D4 306 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 SPARTQ8N0X7 666 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 ZCCHC7Q8N3Z6 543 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 CPSF7Q8N684 471 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 ASCC1Q8N9N2 400 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 SNX31Q8N9S9 440 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 GALNT6Q8NCL4 622 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 TUBA1CQ9BQE3 449 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 SGIP1Q9BQI5 828 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 R3HDMLQ9H3Y0 253 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 ZNF304Q9HCX3 659 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 KLHL11Q9NVR0 708 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 RIMS3Q9UJD0 308 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 HES2Q9Y543 173 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FAM25AB3EWG3 89 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FAM25CB3EWG5 89 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FAM25GB3EWG6 89 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 SNPHO15079 494 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 SERPINB10P48595 397 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 RGS7P49802 495 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 EIF3EP60228 445 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 ECT2LQ008S8 904 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 PRKCQQ04759 706 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 NFATC3Q12968 1075 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 ZBTB41Q5SVQ8 909 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 SPOUT1Q5T280 376 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 CXCL17Q6UXB2 119 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 ENOSF1Q7L5Y1 443 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 CACTIN-AS1Q8N1I8 211 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 BEST2Q8NFU1 509 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 OMA1Q96E52 524 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FAM193BQ96PV7 902 aaPredicted RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 VPS35Q96QK1 796 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 HOXD1Q9GZZ0 328 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FAM49BQ9NUQ9 324 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 TXNDC16Q9P2K2 825 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 KCNN3Q9UGI6 736 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 RNF11Q9Y3C5 154 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 MSI1O43347 362 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 MED7O43513 233 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 GAS2O43903 313 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 CYP11B1P15538 503 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 CDH15P55291 814 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FCGRTP55899 365 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 ARPP19P56211 112 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 COPZ1P61923 177 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 NIPAL4Q0D2K0 466 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 HSPA14Q0VDF9 509 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 CUL2Q13617 745 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 HADHQ16836 314 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 AASDHQ4L235 1098 aaPredicted RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 PDPK2PQ6A1A2 396 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 DPY19L2P1Q6NXN4 242 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 CARM1Q86X55 608 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 TICAM1Q8IUC6 712 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 COLGALT2Q8IYK4 626 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 ABI1Q8IZP0 508 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 FAM47BQ8NA70 645 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 TMC2Q8TDI7 906 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 CNDP2Q96KP4 475 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 DOK1Q99704 481 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 C12orf65Q9H3J6 166 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 MAGEE1Q9HCI5 957 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 DDX28Q9NUL7 540 aaKnown RBP7.95□□□□□ -1.14
SIK3-203ENST00000415541 PKD2L2Q9NZM6 624 aa7.95□□□□□ -1.14
SIK3-203ENST00000415541 CCDC195A0A1B0GUA6 201 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 PI4K2BG5E9Z4 385 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 GRAP2O75791 330 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 KRT1P04264 644 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 ADORA2BP29275 332 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 ETV4P43268 484 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 RAP1GAPP47736 663 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 CDH8P55286 799 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 P2RX3P56373 397 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 PPP2R2BQ00005 443 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 SLC18A2Q05940 514 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 HERC3Q15034 1050 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 PGS1Q32NB8 556 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 CEP78Q5JTW2 689 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 TMEM26Q6ZUK4 368 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 ARCQ7LC44 396 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 PDIK1LQ8N165 341 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 FIBCD1Q8N539 461 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 NATD1Q8N6N6 113 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 OR5B17Q8NGF7 314 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 RAB2BQ8WUD1 216 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 ZNF597Q96LX8 424 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 ZNF512Q96ME7 567 aaPredicted RBP7.94□□□□□ -1.14
SIK3-203ENST00000415541 PKP2Q99959 881 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 RRN3P2A6NIE6 340 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 H7C0C1 242 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 CDK2AP1O14519 115 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 HUS1O60921 280 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 MAFO75444 373 aaPredicted RBP7.94□□□□□ -1.14
SIK3-203ENST00000415541 COX4I1P13073 169 aa7.94□□□□□ -1.14
SIK3-203ENST00000415541 NELFEP18615 380 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms