RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 HDAC11Q96DB2 347 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 ZNF512Q96ME7 567 aaPredicted RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 C7orf26Q96N11 449 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 EMILIN2Q9BXX0 1053 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 KLC2Q9H0B6 622 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 FAM96AQ9H5X1 160 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 RETREG1Q9H6L5 497 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 PPARGC1AQ9UBK2 798 aaKnown RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 DCTN4Q9UJW0 460 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 NUDT5Q9UKK9 219 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 MAGED2Q9UNF1 606 aaPredicted RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 NEU3Q9UQ49 428 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 DENND4CQ5VZ89 1909 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 WDR91A4D1P6 747 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 ZNF840PA6NDX5 716 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 C5orf67F2Z3F1 127 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 GSC2O15499 205 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 MAP3K7O43318 606 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 MAGEC1O60732 1142 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 KRT38O76015 456 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 RB1P06400 928 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 SNRPAP09012 282 aaKnown RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 CNPP09543 421 aaKnown RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 MAGEA6P43360 314 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 COG7P83436 770 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 MXRA7P84157 204 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 GALNT2Q10471 571 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 TWF1Q12792 350 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 HECTD3Q5T447 861 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 CCDC149Q6ZUS6 474 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 TMC7Q7Z402 723 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 LRRC49Q8IUZ0 686 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 HTR3CQ8WXA8 447 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 TTC17Q96AE7 1141 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 OXNAD1Q96HP4 312 aaPredicted RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 CADM1Q9BY67 442 aaKnown RBP11.8□□□□□ -0.52
RFFL-205ENST00000415395 SCOCQ9UIL1 159 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 SORCS3Q9UPU3 1222 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 CHMP2BQ9UQN3 213 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 MFHAS1Q9Y4C4 1052 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 HS3ST4Q9Y661 456 aa11.8□□□□□ -0.52
RFFL-205ENST00000415395 MKI67P46013 3256 aaKnown RBP11.79□□□□□ -0.52
RFFL-205ENST00000415395 IGLV3-10A0A075B6K4 115 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 A0A0A0MRY4 1105 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 SLC12A8A0AV02 714 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 E9PAM4 449 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 H0Y3Z8 333 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 OPHN1O60890 802 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 PSMG1O95456 288 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 CXCL14O95715 111 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 CTNNB1P35222 781 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 ELK3P41970 407 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 SERPINB4P48594 390 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 SERPINB9P50453 376 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 PPIDQ08752 370 aaKnown RBP11.79□□□□□ -0.52
RFFL-205ENST00000415395 EFTUD2Q15029 972 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFFL-205ENST00000415395 GSTA3Q16772 222 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 PABPC1LQ4VXU2 614 aaKnown RBP11.79□□□□□ -0.52
RFFL-205ENST00000415395 ANKRD22Q5VYY1 191 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 LILRA6Q6PI73 481 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 TMPRSS6Q8IU80 811 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 KIRREL3Q8IZU9 778 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 RFWD2Q8NHY2 731 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 AUTS2Q8WXX7 1259 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 AZIN2Q96A70 460 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 PLD4Q96BZ4 506 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 SPATA13Q96N96 652 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 SAMD11Q96NU1 681 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 VAT1Q99536 393 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 FAM167BQ9BTA0 163 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 SIK2Q9H0K1 926 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 PRDM12Q9H4Q4 367 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 CCSER2Q9H7U1 834 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 C10orf88Q9H8K7 445 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 SLC17A7Q9P2U7 560 aa11.79□□□□□ -0.52
RFFL-205ENST00000415395 STX18Q9P2W9 335 aaKnown RBP11.79□□□□□ -0.52
RFFL-205ENST00000415395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.78□□□□□ -0.52
RFFL-205ENST00000415395 TCRBV9S1A1TA0A576 114 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 TGM5O43548 720 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 AHCYL1O43865 530 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 ENTPD5O75356 428 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 TMEM63AO94886 807 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 TBX18O95935 607 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
RFFL-205ENST00000415395 SYN1P17600 705 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 CNTFP26441 200 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 SERPINB3P29508 390 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 PGM1P36871 562 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 FDFT1P37268 417 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 GARSP41250 739 aaKnown RBP11.78□□□□□ -0.52
RFFL-205ENST00000415395 ETV4P43268 484 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 RAP1GDS1P52306 607 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 SATB1Q01826 763 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 AP1B1Q10567 949 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 KCNJ11Q14654 390 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 RCN1Q15293 331 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 TRMT5Q32P41 509 aaKnown RBP11.78□□□□□ -0.52
RFFL-205ENST00000415395 MS4A13Q5J8X5 152 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 ARTNQ5T4W7 220 aa11.78□□□□□ -0.52
RFFL-205ENST00000415395 PIK3R6Q5UE93 754 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms