RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 SLC26A9Q7LBE3 791 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 SLC47A2Q86VL8 602 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 SPACA3Q8IXA5 215 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 TMIEQ8NEW7 156 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 OR7D4Q8NG98 312 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 RFFLQ8WZ73 363 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 SHC3Q92529 594 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 DEPDC7Q96QD5 511 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 ANLNQ9NQW6 1124 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 TMPRSS4Q9NRS4 437 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 DNAJC12Q9UKB3 198 aa19.76■□□□□ 0.75
UBXN4-202ENST00000415164 AJAP1Q9UKB5 411 aaPredicted RBP19.76■□□□□ 0.75
UBXN4-202ENST00000415164 ZFR2Q9UPR6 939 aaKnown RBP19.76■□□□□ 0.75
UBXN4-202ENST00000415164 GADD45BO75293 160 aaPredicted RBP19.75■□□□□ 0.75
UBXN4-202ENST00000415164 LEFTY1O75610 366 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 NEBLO76041 1014 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 OR1E1P30953 314 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 GABREP78334 506 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 TLE3Q04726 772 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 TPD52L1Q16890 204 aaPredicted RBP19.75■□□□□ 0.75
UBXN4-202ENST00000415164 BRMS1LQ5PSV4 323 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 FAM102AQ5T9C2 384 aaPredicted RBP19.75■□□□□ 0.75
UBXN4-202ENST00000415164 OTUD1Q5VV17 481 aaPredicted RBP19.75■□□□□ 0.75
UBXN4-202ENST00000415164 NEK5Q6P3R8 708 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 DPY19L3Q6ZPD9 716 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 ERICH1Q86X53 443 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 SLC22A18ASQ8N1D0 253 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 DCAF4L2Q8NA75 395 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 APOLD1Q96LR9 279 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 TBCBQ99426 244 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 ARHGEF38Q9NXL2 777 aa19.75■□□□□ 0.75
UBXN4-202ENST00000415164 IPO11Q9UI26 975 aaKnown RBP19.75■□□□□ 0.75
UBXN4-202ENST00000415164 A6NNZ2 444 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 OPA1O60313 960 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 USP12O75317 370 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 C1QL1O75973 258 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 CKMT1AP12532 417 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 PON1P27169 355 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 NEK3P51956 506 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 PCBP4P57723 403 aaKnown RBP19.74■□□□□ 0.75
UBXN4-202ENST00000415164 BROXQ5VW32 411 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 SETD3Q86TU7 594 aaPredicted RBP19.74■□□□□ 0.75
UBXN4-202ENST00000415164 RYBPQ8N488 228 aaPredicted RBP19.74■□□□□ 0.75
UBXN4-202ENST00000415164 ZNF248Q8NDW4 579 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 NPY6RQ99463 290 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 EVA1BQ9NVM1 165 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 RRN3Q9NYV6 651 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 NLGN3Q9NZ94 848 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 RWDD2AQ9UIY3 292 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 PAXBP1Q9Y5B6 917 aa19.74■□□□□ 0.75
UBXN4-202ENST00000415164 MYLKQ15746 1914 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 NEMP2A6NFY4 417 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 GOLGA8SH3BPF8 625 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 TK2O00142 265 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 CSO75390 466 aaKnown RBP19.73■□□□□ 0.75
UBXN4-202ENST00000415164 PAK4O96013 591 aaPredicted RBP19.73■□□□□ 0.75
UBXN4-202ENST00000415164 CXCR3P49682 368 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 CLCN6P51797 869 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 CAMK4Q16566 473 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 C5orf22Q49AR2 442 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 TAF1BQ53T94 588 aaPredicted RBP19.73■□□□□ 0.75
UBXN4-202ENST00000415164 TAF3Q5VWG9 929 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 CACTIN-AS1Q8N1I8 211 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 ZNF397Q8NF99 534 aaPredicted RBP19.73■□□□□ 0.75
UBXN4-202ENST00000415164 MAPK15Q8TD08 544 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 HDAC8Q9BY41 377 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 SLC17A9Q9BYT1 436 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 ZDHHC6Q9H6R6 413 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 ATP13A1Q9HD20 1204 aa19.73■□□□□ 0.75
UBXN4-202ENST00000415164 TEX51A0A1B0GUA7 166 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 I6L893 689 aaPredicted RBP19.72■□□□□ 0.75
UBXN4-202ENST00000415164 FOXN3O00409 490 aaPredicted RBP19.72■□□□□ 0.75
UBXN4-202ENST00000415164 CLCN1P35523 988 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 DUSP3P51452 185 aaPredicted RBP19.72■□□□□ 0.75
UBXN4-202ENST00000415164 HNRNPKP61978 463 aaKnown RBP eCLIP19.72■□□□□ 0.754e-7■■□□□ 13.6
UBXN4-202ENST00000415164 RAPGEF1Q13905 1077 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 C2CD6Q53TS8 623 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 RETSATQ6NUM9 610 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 ZDHHC17Q8IUH5 632 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 DRC7Q8IY82 874 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 TMEM35BQ8NCS4 154 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 IFI44Q8TCB0 444 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 WDR70Q9NW82 654 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 FCF1Q9Y324 198 aaKnown RBP19.72■□□□□ 0.75
UBXN4-202ENST00000415164 DOCK9Q9BZ29 2069 aa19.72■□□□□ 0.75
UBXN4-202ENST00000415164 CPED1A4D0V7 1026 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 POM121BA6NF01 834 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 DRGXA6NNA5 263 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 H3BM21 787 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 K7ESM1 405 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 PES1O00541 588 aaKnown RBP19.71■□□□□ 0.75
UBXN4-202ENST00000415164 NEMP1O14524 444 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 F9P00740 461 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 ADRB3P13945 408 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 RPS21P63220 83 aaKnown RBP19.71■□□□□ 0.75
UBXN4-202ENST00000415164 SGCGQ13326 291 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 CDKN3Q16667 212 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 ARHGAP40Q5TG30 622 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 FOXR1Q6PIV2 292 aa19.71■□□□□ 0.75
UBXN4-202ENST00000415164 CRTC1Q6UUV9 634 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms