RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 TADA1Q96BN2 335 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 KRT12Q99456 494 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 CEP44Q9C0F1 390 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 SP110Q9HB58 689 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 PCDH9Q9HC56 1237 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 THAP10Q9P2Z0 257 aaPredicted RBP13.53□□□□□ -0.24
CNN3-203ENST00000415017 TRHDEQ9UKU6 1024 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 HPCAL4Q9UM19 191 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 ERVW-1Q9UQF0 538 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 ACTL7AQ9Y615 435 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 VCANP13611 3396 aa13.53□□□□□ -0.24
CNN3-203ENST00000415017 ATG2BQ96BY7 2078 aa13.52□□□□□ -0.24
CNN3-203ENST00000415017 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.52□□□□□ -0.25
CNN3-203ENST00000415017 RNF103O00237 685 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 NPC1O15118 1278 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 MUSKO15146 869 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 KCNN4O15554 427 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 SMAD6O43541 496 aaKnown RBP13.52□□□□□ -0.25
CNN3-203ENST00000415017 APODP05090 189 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 ATP5BP06576 529 aaKnown RBP13.52□□□□□ -0.25
CNN3-203ENST00000415017 POLR2EP19388 210 aaKnown RBP13.52□□□□□ -0.25
CNN3-203ENST00000415017 DRD1P21728 446 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.25
CNN3-203ENST00000415017 CSNK1DP48730 415 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 RENBPP51606 427 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 NRLP54845 237 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 FZD5Q13467 585 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 PTK6Q13882 451 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 CCINQ13939 588 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 IHHQ14623 411 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 MLF2Q15773 248 aaPredicted RBP13.52□□□□□ -0.25
CNN3-203ENST00000415017 GLE1Q53GS7 698 aaKnown RBP13.52□□□□□ -0.25
CNN3-203ENST00000415017 ANKRD20A2Q5SQ80 823 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 ANKRD20A1Q5TYW2 823 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 MARC1Q5VT66 337 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 ANKRD20A3Q5VUR7 823 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 C4orf22Q6V702 233 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 KLHL7Q8IXQ5 586 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 PGBD5Q8N414 524 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 GRK7Q8WTQ7 553 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 SPATA13Q96N96 652 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 MGME1Q9BQP7 344 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 GORASP1Q9BQQ3 440 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 LHX3Q9UBR4 397 aa13.52□□□□□ -0.25
CNN3-203ENST00000415017 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.25
CNN3-203ENST00000415017 KRBA1A5PL33 1030 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 FAM187AA6NFU0 413 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 RIOK3O14730 519 aaKnown RBP13.51□□□□□ -0.25
CNN3-203ENST00000415017 TP73O15350 636 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 RAD51CO43502 376 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 OPHN1O60890 802 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 TMCC1O94876 653 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 SLU7O95391 586 aaKnown RBP13.51□□□□□ -0.25
CNN3-203ENST00000415017 JCHAINP01591 159 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 HLA-DQB2P05538 268 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 RPL22P35268 128 aaKnown RBP13.51□□□□□ -0.25
CNN3-203ENST00000415017 MAGEA6P43360 314 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 MMP13P45452 471 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 TUBB4BP68371 445 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 DR1Q01658 176 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 KDSRQ06136 332 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 SLC14A2Q15849 920 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 RALGPS1Q5JS13 557 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 DGKKQ5KSL6 1271 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 LINGO4Q6UY18 593 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 MAATS1Q7Z4T9 603 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 JAMLQ86YT9 394 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 CCDC105Q8IYK2 499 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 CCDC26Q8TAB7 109 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 ARRDC2Q8TBH0 407 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 EXOC4Q96A65 974 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 NSMCE3Q96MG7 304 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 LRRC1Q9BTT6 524 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 RBM22Q9NW64 420 aaKnown RBP eCLIP13.51□□□□□ -0.251e-5■■■■□ 22.7
CNN3-203ENST00000415017 SEPT3Q9UH03 358 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 SLCO3A1Q9UIG8 710 aa13.51□□□□□ -0.25
CNN3-203ENST00000415017 TBC1D3BA6NDS4 549 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 ANTXRLA6NF34 631 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 K7ERQ8 282 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 TTI1O43156 1089 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 ZBTB24O43167 697 aaPredicted RBP13.5□□□□□ -0.25
CNN3-203ENST00000415017 ECEL1O95672 775 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 GAS8O95995 478 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 GSRP00390 522 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 MMP2P08253 660 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 ETS1P14921 441 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 RGRP47804 291 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 STK19P49842 368 aaPredicted RBP13.5□□□□□ -0.25
CNN3-203ENST00000415017 DRG2P55039 364 aaKnown RBP13.5□□□□□ -0.25
CNN3-203ENST00000415017 CBLBQ13191 982 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 PON2Q15165 354 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 E2F5Q15329 346 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 DUPD1Q68J44 220 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 TPRG1Q6ZUI0 275 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 NUDT18Q6ZVK8 323 aa13.5□□□□□ -0.25
CNN3-203ENST00000415017 TSEN2Q8NCE0 465 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms