RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 SHC2P98077 582 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 PUM3Q15397 648 aaKnown RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBRG1Q3YBR2 411 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 BMP2KLQ5H9B9 411 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 WDR45BQ5MNZ6 344 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 TTC39AQ5SRH9 613 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 C10orf76Q5T2E6 689 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 TAF3Q5VWG9 929 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 DAB2IPQ5VWQ8 1189 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 LRIG3Q6UXM1 1119 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 MMS22LQ6ZRQ5 1243 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 RFX8Q6ZV50 586 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 LMNTD2Q8IXW0 634 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 ADGRF3Q8IZF5 1079 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 ENAHQ8N8S7 591 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 ZNF527Q8NB42 609 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 LSM14AQ8ND56 463 aaKnown RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 ATP2A3Q93084 1043 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 GCC1Q96CN9 775 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 LYZL4Q96KX0 146 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 HERPUD2Q9BSE4 406 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 WDR12Q9GZL7 423 aaKnown RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 TASP1Q9H6P5 420 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 IL21RQ9HBE5 538 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 LIN7CQ9NUP9 197 aaKnown RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 PGAP2Q9UHJ9 254 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 CNTN6Q9UQ52 1028 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 TNFSF13BQ9Y275 285 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 LRCH1Q9Y2L9 728 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 ATP10BO94823 1461 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 IQSEC2Q5JU85 1478 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 KDM5AP29375 1690 aaKnown RBP4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 MYO3AQ8NEV4 1616 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 KIF24Q5T7B8 1368 aa4.02□□□□□ -1.77
HMGB3P23-201ENST00000414981 SPHKAPQ2M3C7 1700 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 ARAP3Q8WWN8 1544 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3DA0A087WVF3 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3IA0A087WXS9 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3EA0A087X179 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3KA0A087X1G2 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TMEM272A0A1B0GTI8 110 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 A0A1W2PPC1 479 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3BA6NDS4 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 PABPN1LA6NDY0 278 aaKnown RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A18PA6NE21 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3FA6NER0 549 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A16PA6NEW6 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A8PA6NJQ4 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A9PA6NNJ1 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A5PA8MXJ8 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3LB9A6J9 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 SPTLC2O15270 562 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 ASNA1O43681 348 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 SYF2O95926 243 aaKnown RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 AGR2O95994 175 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 IFNA2P01563 188 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 ALPLP05186 524 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A15PP0C7V4 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A13PP0C7W8 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A14PP0C7W9 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM90A24PP0C7X0 464 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3HP0C7X1 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 CIITAP33076 1130 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 ADD2P35612 726 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TNNT2P45379 298 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 GPR162Q16538 588 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 PFKFB4Q16877 469 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 PRTGQ2VWP7 1150 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 DNAJC21Q5F1R6 531 aaKnown RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 C6orf10Q5SRN2 563 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 ATPAF1Q5TC12 328 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3GQ6DHY5 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3CQ6IPX1 549 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 CYB5R4Q7L1T6 521 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TRAPPC11Q7Z392 1133 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 DDIASQ8IXT1 998 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TBC1D3Q8IZP1 549 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 OR8H2Q8N162 312 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 NKAIN3Q8N8D7 197 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 STYXQ8WUJ0 223 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TMEM174Q8WUU8 243 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 ARHGAP45Q92619 1136 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 MARK4Q96L34 752 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 CFAP53Q96M91 514 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 MECRQ9BV79 373 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 SPAG4Q9NPE6 437 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 OBP2BQ9NPH6 170 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 HERC5Q9UII4 1024 aaKnown RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 CDC23Q9UJX2 597 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 RAB21Q9UL25 225 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TMCC3Q9ULS5 477 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 MAGED2Q9UNF1 606 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 SLC8A2Q9UPR5 921 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 DTX4Q9Y2E6 619 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 MORC2Q9Y6X9 1032 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 SETBP1Q9Y6X0 1596 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 MYO5CQ9NQX4 1742 aa4.01□□□□□ -1.77
HMGB3P23-201ENST00000414981 TTC3P53804 2025 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 MYOM1P52179 1685 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 PLB1Q6P1J6 1458 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms