RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ANO10Q9NW15 660 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 SMPD4Q9NXE4 827 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS41-205ENST00000414632 TRPM5Q9NZQ8 1165 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 UXTQ9UBK9 157 aaPredicted RBP5.12□□□□□ -1.59
VPS41-205ENST00000414632 CHORDC1Q9UHD1 332 aaPredicted RBP5.12□□□□□ -1.59
VPS41-205ENST00000414632 NUDT5Q9UKK9 219 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 TSPAN16Q9UKR8 245 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 B3GALT1Q9Y5Z6 326 aa5.12□□□□□ -1.59
VPS41-205ENST00000414632 TRAV19A0A0A6YYK7 116 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 ZNF840PA6NDX5 716 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 HHLA1C9JL84 531 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 M0QYV0 167 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 ZNF263O14978 683 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 MDM4O15151 490 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 P4HA2O15460 535 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 RTN3O95197 1032 aaPredicted RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 FGF19O95750 216 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 IL33O95760 270 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 IGLV1-40P01703 118 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 CYP17A1P05093 508 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 DCNP07585 359 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 ARSAP15289 507 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 PSMC3P17980 439 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 TRIM21P19474 475 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 LPOP22079 712 aaPredicted RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 TBXAS1P24557 533 aaPredicted RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 PON1P27169 355 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 YWHAQP27348 245 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 RGS7P49802 495 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 YWHAEP62258 255 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 ZXDBP98169 803 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 UBXN2BQ14CS0 331 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 ACAP2Q15057 778 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 KRT31Q15323 416 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 MLF2Q15773 248 aaPredicted RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 EXOC3L4Q17RC7 722 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 SLC44A4Q53GD3 710 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 TCP11X2Q5H9J9 407 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 MROH9Q5TGP6 573 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 CPZQ66K79 652 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 TPRG1Q6ZUI0 275 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 FRMD7Q6ZUT3 714 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 PIGZQ86VD9 579 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 MON1AQ86VX9 555 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 MFSD6LQ8IWD5 586 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 FAM114A1Q8IWE2 563 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 SUGP1Q8IWZ8 645 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 NLGN4XQ8N0W4 816 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 LZTR1Q8N653 840 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 TMEM105Q8N8V8 129 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 ASB11Q8WXH4 323 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 DLG3Q92796 817 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 SECISBP2LQ93073 1101 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 WBP2Q969T9 261 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 SLC39A13Q96H72 371 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 LRGUKQ96M69 825 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 SLITRK1Q96PX8 696 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 HNRNPABQ99729 332 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 G6PC3Q9BUM1 346 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 TRMT61BQ9BVS5 477 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 TTLL2Q9BWV7 592 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 LSM14BQ9BX40 385 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 DUSP16Q9BY84 665 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 CD244Q9BZW8 370 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 GPR88Q9GZN0 384 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 RNF38Q9H0F5 515 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 NDST4Q9H3R1 872 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 EBF3Q9H4W6 596 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 ZMAT4Q9H898 229 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 TBC1D17Q9HA65 648 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 NMUR1Q9HB89 426 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 CSNK1G1Q9HCP0 422 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 SLC6A20Q9NP91 592 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 SIX2Q9NPC8 291 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 SLC2A4RGQ9NR83 387 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 OSER1Q9NX31 292 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 GTSE1Q9NYZ3 720 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 ZC3H7BQ9UGR2 993 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 EBF1Q9UH73 591 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 NDRG2Q9UN36 371 aaKnown RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 SRPK3Q9UPE1 567 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 MTF2Q9Y483 593 aaPredicted RBP5.11□□□□□ -1.59
VPS41-205ENST00000414632 CPQQ9Y646 472 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 WNT6Q9Y6F9 365 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 COMMD10Q9Y6G5 202 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 ATP23Q9Y6H3 246 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 VPS13AQ96RL7 3174 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 MYO15AQ9UKN7 3530 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 ZDBF2Q9HCK1 2354 aa5.11□□□□□ -1.59
VPS41-205ENST00000414632 FRYLO94915 3013 aa5.1□□□□□ -1.59
VPS41-205ENST00000414632 OTOL1A6NHN0 477 aaPredicted RBP5.1□□□□□ -1.59
VPS41-205ENST00000414632 BECN2A8MW95 431 aa5.1□□□□□ -1.59
VPS41-205ENST00000414632 LEFTY2O00292 366 aa5.1□□□□□ -1.59
VPS41-205ENST00000414632 O00370 1275 aa5.1□□□□□ -1.59
VPS41-205ENST00000414632 KRIT1O00522 736 aa5.1□□□□□ -1.59
VPS41-205ENST00000414632 PMM2O15305 246 aa5.1□□□□□ -1.59
VPS41-205ENST00000414632 GSC2O15499 205 aa5.1□□□□□ -1.59
VPS41-205ENST00000414632 COCHO43405 550 aa5.1□□□□□ -1.59
VPS41-205ENST00000414632 THAP12O43422 761 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms