RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 CTNNAL1Q9UBT7 734 aa11.51□□□□□ -0.57
LINC00330-201ENST00000414562 ZC3H7BQ9UGR2 993 aaKnown RBP11.51□□□□□ -0.57
LINC00330-201ENST00000414562 DPP7Q9UHL4 492 aa11.51□□□□□ -0.57
LINC00330-201ENST00000414562 USP15Q9Y4E8 981 aaPredicted RBP11.51□□□□□ -0.57
LINC00330-201ENST00000414562 MAD1L1Q9Y6D9 718 aa11.51□□□□□ -0.57
LINC00330-201ENST00000414562 TEX264Q9Y6I9 313 aa11.51□□□□□ -0.57
LINC00330-201ENST00000414562 WASH4PA8MWX3 477 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TRDMT1O14717 391 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 ZBTB24O43167 697 aaPredicted RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 SPAG6O75602 509 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 FOSL2P15408 326 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 HOXB8P17481 243 aaPredicted RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 KCNA5P22460 613 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 SP100P23497 879 aaPredicted RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 FCARP24071 287 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 SLC11A2P49281 568 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 ZBTB17Q13105 803 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 PRPSAP1Q14558 356 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TMED2Q15363 201 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 KLHL38Q2WGJ6 581 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 FAM133BQ5BKY9 247 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 FBXL22Q6P050 247 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 ZNF354CQ86Y25 554 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 RIBC1Q8N443 379 aaPredicted RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 FBF1Q8TES7 1133 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 USP33Q8TEY7 942 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 ARHGEF2Q92974 986 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 LRRC39Q96DD0 335 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TSGA13Q96PP4 275 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 PRMT1Q99873 361 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 WDR83Q9BRX9 315 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 PLA2G2FQ9BZM2 168 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 GBA3Q9H227 469 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 UBE2ZQ9H832 354 aaPredicted RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 CNOT10Q9H9A5 744 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 PPARGC1AQ9UBK2 798 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 ARHGAP42A6NI28 874 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 F5H5T6 163 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 LEFTY2O00292 366 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 CKMP06732 381 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 CCNB1P14635 433 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TACR2P21452 398 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 PAPOLAP51003 745 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 GEMIN4P57678 1058 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TFF2Q03403 129 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 EMC10Q5UCC4 262 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TIGD7Q6NT04 549 aaPredicted RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 CASC4Q6P4E1 433 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 RFWD3Q6PCD5 774 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 Q6ZNB5 142 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 ARHGAP36Q6ZRI8 547 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 LRRC49Q8IUZ0 686 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 DENND1CQ8IV53 801 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 LGI2Q8N0V4 545 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TTC16Q8NEE8 873 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 ZSCAN18Q8TBC5 510 aaPredicted RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 LINC00597Q9H2U6 94 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 CXorf56Q9H5V9 222 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 NDFIP2Q9NV92 336 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 CFAP97Q9P2B7 532 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 LGALS13Q9UHV8 139 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 SLC24A2Q9UI40 661 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 RABGEF1Q9UJ41 708 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 AGO1Q9UL18 857 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TTLL3Q9Y4R7 772 aa11.5□□□□□ -0.57
LINC00330-201ENST00000414562 NYNRINQ9P2P1 1898 aaKnown RBP11.5□□□□□ -0.57
LINC00330-201ENST00000414562 TRAV19A0A0A6YYK7 116 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 GFRA2O00451 464 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 MATN3O15232 486 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 ACSL4O60488 711 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 CNTN5O94779 1100 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 MLNP12872 115 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 NFKB1P19838 968 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 CORO1AP31146 461 aaKnown RBP11.49□□□□□ -0.57
LINC00330-201ENST00000414562 GRIA1P42261 906 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 NDST2P52849 883 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 SESN2P58004 480 aaPredicted RBP11.49□□□□□ -0.57
LINC00330-201ENST00000414562 GUCY1A3Q02108 690 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 SPARCL1Q14515 664 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 ALFQ53S48 1182 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 LRRC8BQ6P9F7 803 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 NLRP14Q86W24 1093 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 BBS7Q8IWZ6 715 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC00330-201ENST00000414562 SH3RF2Q8TEC5 729 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 IGSF8Q969P0 613 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 PLD4Q96BZ4 506 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 ASIC4Q96FT7 647 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 TEKT5Q96M29 485 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 XPO6Q96QU8 1125 aaKnown RBP11.49□□□□□ -0.57
LINC00330-201ENST00000414562 CYTH2Q99418 400 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 ACSS3Q9H6R3 686 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 TMEM248Q9NWD8 314 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 PSMC3IPQ9P2W1 217 aaPredicted RBP11.49□□□□□ -0.57
LINC00330-201ENST00000414562 ARHGAP26Q9UNA1 814 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 IKBKGQ9Y6K9 419 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
LINC00330-201ENST00000414562 IGLV3-10A0A075B6K4 115 aa11.48□□□□□ -0.57
LINC00330-201ENST00000414562 SDR42E2A6NKP2 422 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms