RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 UPB1Q9UBR1 384 aa5.65□□□□□ -1.5
ATG4C-204ENST00000414558 PLEKHB1Q9UF11 243 aaPredicted RBP5.65□□□□□ -1.5
ATG4C-204ENST00000414558 ICKQ9UPZ9 632 aa5.65□□□□□ -1.5
ATG4C-204ENST00000414558 SRPRBQ9Y5M8 271 aaKnown RBP5.65□□□□□ -1.5
ATG4C-204ENST00000414558 ASAP2O43150 1006 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 RBM5P52756 815 aaKnown RBP eCLIP5.64□□□□□ -1.51
ATG4C-204ENST00000414558 PMS2P54278 862 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 CDH12P55289 794 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 THOC5Q13769 683 aaKnown RBP5.64□□□□□ -1.51
ATG4C-204ENST00000414558 TDRD12Q587J7 1177 aaKnown RBP5.64□□□□□ -1.51
ATG4C-204ENST00000414558 SYT13Q7L8C5 426 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 RASGRP2Q7LDG7 609 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 RBM23Q86U06 439 aaKnown RBP5.64□□□□□ -1.51
ATG4C-204ENST00000414558 SERPINA11Q86U17 422 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 SPICE1Q8N0Z3 855 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 SCAIQ8N9R8 606 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 ADAMTS14Q8WXS8 1223 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 GOLGA1Q92805 767 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 GFM1Q96RP9 751 aaKnown RBP5.64□□□□□ -1.51
ATG4C-204ENST00000414558 CDT1Q9H211 546 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 THAP1Q9NVV9 213 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 DHDHQ9UQ10 334 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 RAI2Q9Y5P3 530 aa5.64□□□□□ -1.51
ATG4C-204ENST00000414558 CCDC194A0A1B0GVG4 234 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 HSPB6O14558 160 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 LDB2O43679 373 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 STRNO43815 780 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 METTL18O95568 372 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 AVPR2P30518 371 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 RFC1P35251 1148 aaPredicted RBP5.63□□□□□ -1.51
ATG4C-204ENST00000414558 CHAF1AQ13111 956 aaPredicted RBP5.63□□□□□ -1.51
ATG4C-204ENST00000414558 MORC3Q14149 939 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 VPS37AQ8NEZ2 397 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 C6orf106Q9H6K1 298 aaPredicted RBP5.63□□□□□ -1.51
ATG4C-204ENST00000414558 PLEKHA2Q9HB19 425 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 SAYSD1Q9NPB0 183 aa5.63□□□□□ -1.51
ATG4C-204ENST00000414558 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 EYA2O00167 538 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 KRT38O76015 456 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 ARSAP15289 507 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 ART1P52961 327 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 NUDT6P53370 316 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 TIGD6Q17RP2 521 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 ZNF284Q2VY69 593 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 PRAMEF19Q5SWL8 479 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 NCAPH2Q6IBW4 605 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 DLK2Q6UY11 383 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 TMC8Q8IU68 726 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 OR14A16Q8NHC5 309 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 SPATA3Q8NHX4 192 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 RUBCNQ92622 972 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 KTI12Q96EK9 354 aaPredicted RBP5.62□□□□□ -1.51
ATG4C-204ENST00000414558 GRHPRQ9UBQ7 328 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 FBXO40Q9UH90 709 aa5.62□□□□□ -1.51
ATG4C-204ENST00000414558 SRP68Q9UHB9 627 aaKnown RBP5.62□□□□□ -1.51
ATG4C-204ENST00000414558 SOX30O94993 753 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 CLDN7O95471 211 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 HMGB1P09429 215 aaKnown RBP5.61□□□□□ -1.51
ATG4C-204ENST00000414558 FCGR1AP12314 374 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 NAGAP17050 411 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 YWHAQP27348 245 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 PRKAA2P54646 552 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 RRP1P56182 461 aaKnown RBP5.61□□□□□ -1.51
ATG4C-204ENST00000414558 TRIM14Q14142 442 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 HNF4GQ14541 408 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 SDCCAG3Q96C92 435 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 SLC39A13Q96H72 371 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 MPHOSPH6Q99547 160 aaKnown RBP5.61□□□□□ -1.51
ATG4C-204ENST00000414558 GRHL1Q9NZI5 618 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 TAGLN3Q9UI15 199 aa5.61□□□□□ -1.51
ATG4C-204ENST00000414558 DDTLA6NHG4 134 aaPredicted RBP5.6□□□□□ -1.51
ATG4C-204ENST00000414558 IPO5O00410 1097 aaKnown RBP5.6□□□□□ -1.51
ATG4C-204ENST00000414558 CSF1P09603 554 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 TNNT1P13805 278 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 DPP6P42658 865 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 AMTP48728 403 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 MVDP53602 400 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 GAS1P54826 345 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 HLFQ16534 295 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 IZUMO4Q1ZYL8 232 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 TBC1D9BQ66K14 1250 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 NOL8Q76FK4 1167 aaKnown RBP5.6□□□□□ -1.51
ATG4C-204ENST00000414558 MON1BQ7L1V2 547 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 TRIM74Q86UV6 250 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 TRIM73Q86UV7 250 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 GALNT15Q8N3T1 639 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 CSGALNACT1Q8TDX6 532 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 FAM216AQ8WUB2 273 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 THAP4Q8WY91 577 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 NCSTNQ92542 709 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 PAGR1Q9BTK6 254 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 VPS33BQ9H267 617 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 PCDHGB1Q9Y5G3 927 aa5.6□□□□□ -1.51
ATG4C-204ENST00000414558 OR6C68A6NDL8 312 aa5.59□□□□□ -1.51
ATG4C-204ENST00000414558 HBP1O60381 514 aa5.59□□□□□ -1.51
ATG4C-204ENST00000414558 CBX6O95503 412 aa5.59□□□□□ -1.51
ATG4C-204ENST00000414558 GJC1P36383 396 aa5.59□□□□□ -1.51
ATG4C-204ENST00000414558 THPOP40225 353 aa5.59□□□□□ -1.51
ATG4C-204ENST00000414558 GPR12P47775 334 aa5.59□□□□□ -1.51
ATG4C-204ENST00000414558 SEC61A1P61619 476 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms