RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 PLK1P53350 603 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 CCNIQ14094 377 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 LSM12Q3MHD2 195 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 TIGD5Q53EQ6 642 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 NTAN1Q96AB6 310 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 NXNL1Q96CM4 212 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 ELMO2Q96JJ3 720 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 TUBGCP5Q96RT8 1024 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 CDRT15Q96T59 188 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 PARK7Q99497 189 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 SLC2A6Q9UGQ3 507 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 ADAMTS6Q9UKP5 1117 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 NEMP2A6NFY4 417 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 TMEM233B4DJY2 109 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 MT-CO1P00395 513 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 F9P00740 461 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 LYNP07948 512 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 MYL4P12829 197 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 TFEBP19484 476 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 LBRQ14739 615 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 SFT2D3Q587I9 215 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 NOMO2Q5JPE7 1267 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 TMCO4Q5TGY1 634 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 EPGNQ6UW88 154 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 ACAD11Q709F0 780 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 SCN4BQ8IWT1 228 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 OR6Y1Q8NGX8 325 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 DQX1Q8TE96 717 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 TMA16Q96EY4 203 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 SMARCD1Q96GM5 515 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 PPP1R10Q96QC0 940 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 PTPN18Q99952 460 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 MPP6Q9NZW5 540 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 ZDHHC2Q9UIJ5 367 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 GNEQ9Y223 722 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 ACOT9Q9Y305 439 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 HOXD8P13378 290 aaPredicted RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 PIK3R1P27986 724 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 LRPAP1P30533 357 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 ZC3HC1Q86WB0 502 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 TMEM209Q96SK2 561 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 NDNQ99608 321 aa14.04□□□□□ -0.16
NUB1-201ENST00000413040 SPATS2LQ9NUQ6 558 aaKnown RBP14.04□□□□□ -0.16
NUB1-201ENST00000413040 RBM22Q9NW64 420 aaKnown RBP eCLIP14.04□□□□□ -0.16
NUB1-201ENST00000413040 HDAC3O15379 428 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 JUNP05412 331 aaKnown RBP14.03□□□□□ -0.16
NUB1-201ENST00000413040 RPL14P50914 215 aaKnown RBP14.03□□□□□ -0.16
NUB1-201ENST00000413040 AQP4P55087 323 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 GALNT2Q10471 571 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 MED21Q13503 144 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 ART3Q13508 389 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 PCBP1Q15365 356 aaKnown RBP eCLIP14.03□□□□□ -0.16
NUB1-201ENST00000413040 FAM110CQ1W6H9 321 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 CMPK2Q5EBM0 449 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 GNASQ5JWF2 1037 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 KCTD11Q693B1 232 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 CXCL17Q6UXB2 119 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 RNF111Q6ZNA4 994 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 RPS27LQ71UM5 84 aaKnown RBP14.03□□□□□ -0.16
NUB1-201ENST00000413040 ACTRT2Q8TDY3 377 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 RCN3Q96D15 328 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 GPAMQ9HCL2 828 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 SLC38A7Q9NVC3 462 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 SF3B1O75533 1304 aaKnown RBP eCLIP14.03□□□□□ -0.168e-6■■■■■ 107
NUB1-201ENST00000413040 MAGEB16A2A368 324 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 ERI2A8K979 691 aaKnown RBP14.03□□□□□ -0.16
NUB1-201ENST00000413040 DDHD2O94830 711 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 HNRNPLP14866 589 aaKnown RBP eCLIP14.03□□□□□ -0.16
NUB1-201ENST00000413040 PCSK1P29120 753 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 CPT1AP50416 773 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 CSE1LP55060 971 aaKnown RBP14.03□□□□□ -0.16
NUB1-201ENST00000413040 MRPS22P82650 360 aaKnown RBP14.03□□□□□ -0.16
NUB1-201ENST00000413040 SEMA3BQ13214 749 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 CSHL1Q14406 222 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 MMEL1Q495T6 779 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 BTBD8Q5XKL5 378 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 ZNF470Q6ECI4 717 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 FBXW8Q8N3Y1 598 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 GCNAQ96QF7 691 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 RHOJQ9H4E5 214 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 PRDM16Q9HAZ2 1276 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 OXSMQ9NWU1 459 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 MID2Q9UJV3 735 aa14.03□□□□□ -0.16
NUB1-201ENST00000413040 FAM95CA0A1B0GW59 222 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 STX16-NPEPL1H3BU86 382 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 STMN1P16949 149 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 XKR4Q5GH76 650 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 LIPMQ5VYY2 423 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 OR52E8Q6IFG1 317 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 GATA6Q92908 595 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 TBL1YQ9BQ87 522 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 NDFIP2Q9NV92 336 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 RAP2CQ9Y3L5 183 aa14.02□□□□□ -0.16
NUB1-201ENST00000413040 ARL5CA6NH57 179 aa14.02□□□□□ -0.17
NUB1-201ENST00000413040 CCNT2O60583 730 aaKnown RBP14.02□□□□□ -0.17
NUB1-201ENST00000413040 GABRB3P28472 473 aa14.02□□□□□ -0.17
NUB1-201ENST00000413040 MAXP61244 160 aa14.02□□□□□ -0.17
NUB1-201ENST00000413040 FSCN1Q16658 493 aaKnown RBP14.02□□□□□ -0.17
NUB1-201ENST00000413040 SDHAF4Q5VUM1 108 aa14.02□□□□□ -0.17
NUB1-201ENST00000413040 TFAP2DQ7Z6R9 452 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms