RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 RBM6P78332 1123 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 E2F1Q01094 437 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 TAP1Q03518 808 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 AIMP2Q13155 320 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 SEMA3BQ13214 749 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 BFSP2Q13515 415 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 THOC5Q13769 683 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 KCNJ12Q14500 433 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 KCNB1Q14721 858 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 NTRK2Q16620 822 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CYP1B1Q16678 543 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 AASDHQ4L235 1098 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 FNDC7Q5VTL7 733 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 DENND2CQ68D51 928 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CCDC144NLQ6NUI1 221 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 TMEM154Q6P9G4 183 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 SLC30A9Q6PML9 568 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 PARS2Q7L3T8 475 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 PIWIL3Q7Z3Z3 882 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 WDR53Q7Z5U6 358 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 SPRED1Q7Z699 444 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 PRRT2Q7Z6L0 340 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 GLRX5Q86SX6 157 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 GGNQ86UU5 652 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 MON1AQ86VX9 555 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 METTL23Q86XA0 190 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 DNAAF5Q86Y56 855 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 TNIP2Q8NFZ5 429 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 LILRB1Q8NHL6 650 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 GSDMBQ8TAX9 411 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 INTS12Q96CB8 462 aaKnown RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 RNFT2Q96EX2 444 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 WDYHV1Q96HA8 205 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 C5orf34Q96MH7 638 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 PRR25Q96S07 402 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 PI4K2AQ9BTU6 479 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 ACAT2Q9BWD1 397 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 DNAI2Q9GZS0 605 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CLPBQ9H078 707 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 SH2D4AQ9H788 454 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 MMRN2Q9H8L6 949 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 SYNPO2LQ9H987 977 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 COPS7BQ9H9Q2 264 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 CYP4F11Q9HBI6 524 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 LTB4R2Q9NPC1 389 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 RXFP3Q9NSD7 469 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 GIMAP4Q9NUV9 329 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 TRPC5Q9UL62 973 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 MAFFQ9ULX9 164 aa4.76□□□□□ -1.65
BRCA1-204ENST00000412061 FNDC1Q4ZHG4 1894 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3DA0A087WVF3 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3IA0A087WXS9 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3EA0A087X179 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3KA0A087X1G2 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TEX13CA0A0J9YWL9 993 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 hCG_1809904A0A1W2PP81 198 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 A0A1W2PPE2 198 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 A0A1W2PR64 198 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 GXYLT2A0PJZ3 443 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CCDC151A5D8V7 595 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3BA6NDS4 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3FA6NER0 549 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 BTBD18B2RXH4 712 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3LB9A6J9 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 AP4M1O00189 453 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CES2O00748 559 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 SPRY2O43597 315 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TMPRSS11DO60235 418 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TJP3O95049 919 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3HP0C7X1 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 NDUFB7P17568 137 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 MMP8P22894 467 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CTGFP29279 349 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 ARL1P40616 181 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CD86P42081 329 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 PCP4P48539 62 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 NRIP1P48552 1158 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 MRPL12P52815 198 aaKnown RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 RCAN1P53805 252 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 PRAMEP78395 509 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 MRPS35P82673 323 aaKnown RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 GOLGA8DPQ0D2H9 430 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 C17orf67Q0P5P2 114 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 NFE2L1Q14494 772 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 PARP10Q53GL7 1025 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 FAM90A2PQ658T7 463 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3GQ6DHY5 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3CQ6IPX1 549 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 RAB12Q6IQ22 244 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 GRHL2Q6ISB3 625 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 KRT80Q6KB66 452 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CAVIN1Q6NZI2 390 aaKnown RBP4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CDC73Q6P1J9 531 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 MTHFD1LQ6UB35 978 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 PTCHD4Q6ZW05 846 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 Q6ZWC4 215 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 CCDC186Q7Z3E2 898 aa4.75□□□□□ -1.65
BRCA1-204ENST00000412061 TBC1D3Q8IZP1 549 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms