RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TASP1Q9H6P5 420 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 YY1AP1Q9H869 796 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 VPS45Q9NRW7 570 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 RASSF1Q9NS23 344 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 SIRT3Q9NTG7 399 aaPredicted RBP2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 FEM1BQ9UK73 627 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 UTS2RQ9UKP6 389 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 DAPP1Q9UN19 280 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 TOP2BQ02880 1626 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 PTPN23Q9H3S7 1636 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 TEX14Q8IWB6 1497 aa2.7□□□□□ -1.98
HMGB3P2-201ENST00000411913 CFAP43Q8NDM7 1665 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 SMARCA4P51532 1647 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 UQCRHLA0A096LP55 91 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 GXYLT2A0PJZ3 443 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 DPPA5A6NC42 116 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 TTC34A8MYJ7 566 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 H0Y3Z8 333 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 RPP40O75818 363 aaKnown RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 LARGE1O95461 756 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 CER1O95813 267 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 AGR2O95994 175 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 IFNA2P01563 188 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 PYGLP06737 847 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 PRSS2P07478 247 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 UQCRHP07919 91 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 SLC3A2P08195 630 aaKnown RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 TMEM225BP0DP42 221 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 CKMT1AP12532 417 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 AKT1P31749 480 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 CIITAP33076 1130 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 PBX1P40424 430 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 GSTM5P46439 218 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 MCM2P49736 904 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 PRKAA2P54646 552 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 ACTR2P61160 394 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 TLE2Q04725 743 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 CUL4BQ13620 913 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 KCNJ12Q14500 433 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 SMAD1Q15797 465 aaKnown RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 TBRG1Q3YBR2 411 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 TMEM196Q5HYL7 178 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 FAM90A2PQ658T7 463 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 TTLL5Q6EMB2 1281 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 MSANTD2Q6P1R3 559 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 FAM83HQ6ZRV2 1179 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 PIK3AP1Q6ZUJ8 805 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 ANKS1BQ7Z6G8 1248 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 LRRTM4Q86VH4 590 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 C2CD5Q86YS7 1000 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 NAXEQ8NCW5 288 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 C7orf57Q8NEG2 295 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 HERVK_113Q902F9 699 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 CPT1BQ92523 772 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 CELF1Q92879 486 aaKnown RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 RILPL2Q969X0 211 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 PRR11Q96HE9 360 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 PPM1MQ96MI6 270 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 SENP7Q9BQF6 1050 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 ELAC1Q9H777 363 aaKnown RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 RIC8AQ9NPQ8 531 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 TCF7L2Q9NQB0 619 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 G6PC2Q9NQR9 355 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 ASNSD1Q9NWL6 643 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 CHMP5Q9NZZ3 219 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 NDUFAF4Q9P032 175 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 SLC13A4Q9UKG4 626 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 VPS4AQ9UN37 437 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 CNTN6Q9UQ52 1028 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 VIRMAQ69YN4 1812 aaKnown RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 EIF3AQ14152 1382 aaKnown RBP2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 GAPVD1Q14C86 1478 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 PLEKHH2Q8IVE3 1493 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 MBD5Q9P267 1494 aa2.69□□□□□ -1.98
HMGB3P2-201ENST00000411913 RAD50Q92878 1312 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 FMN1Q68DA7 1419 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 FGD6Q6ZV73 1430 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 BIVM-ERCC5R4GMW8 1640 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 LOC105369274A0A096LPK9 316 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 LOC102723532A0A0G2JNH3 316 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 HMGB1P1B2RPK0 211 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 E7EVH7 732 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 EYA2O00167 538 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 HOXC11O43248 304 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 PPP6R2O75170 966 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 TFRCP02786 760 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 CYP1A2P05177 515 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 PTMSP20962 102 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 MMP8P22894 467 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 YY1P25490 414 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 SERPINA4P29622 427 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 TNNT2P45379 298 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 VAMP2P63027 116 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 RAE1P78406 368 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 IRX3P78415 501 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 HMGN5P82970 282 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 EEF1A2Q05639 463 aaKnown RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 GABPB1Q06547 395 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 SEMA3BQ13214 749 aa2.68□□□□□ -1.98
HMGB3P2-201ENST00000411913 RPS6KA2Q15349 733 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms