RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 PLA2G2AP14555 144 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 KRT9P35527 623 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 LSSP48449 732 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 CLCN6P51797 869 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 HNRNPKP61978 463 aaKnown RBP eCLIP17.09■□□□□ 0.33
MRPL55-220ENST00000411464 GABREP78334 506 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 CFHR1Q03591 330 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 ALFQ53S48 1182 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 TAF1BQ53T94 588 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-220ENST00000411464 BRMS1LQ5PSV4 323 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 SEL1L3Q68CR1 1132 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 LINGO4Q6UY18 593 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 GCNT7Q6ZNI0 430 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 ABI3BPQ7Z7G0 1075 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 FAM181AQ8N9Y4 354 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 CHST14Q8NCH0 376 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 C1orf131Q8NDD1 294 aaKnown RBP17.09■□□□□ 0.33
MRPL55-220ENST00000411464 GRIN3AQ8TCU5 1115 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 TNKS2Q9H2K2 1166 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 POLR1BQ9H9Y6 1135 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 PIGVQ9NUD9 493 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 APEX2Q9UBZ4 518 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 IL36AQ9UHA7 158 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 ZFR2Q9UPR6 939 aaKnown RBP17.09■□□□□ 0.33
MRPL55-220ENST00000411464 PAXBP1Q9Y5B6 917 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 HS3ST3A1Q9Y663 406 aa17.09■□□□□ 0.33
MRPL55-220ENST00000411464 SETXQ7Z333 2677 aaKnown RBP17.08■□□□□ 0.33
MRPL55-220ENST00000411464 K7ESM1 405 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 ERVH48-1M5A8F1 160 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 CSO75390 466 aaKnown RBP17.08■□□□□ 0.32
MRPL55-220ENST00000411464 DXOO77932 396 aaKnown RBP17.08■□□□□ 0.32
MRPL55-220ENST00000411464 ENDOD1O94919 500 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 ADCY5O95622 1261 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 F9P00740 461 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 ERBB2P04626 1255 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 GIMD1P0DJR0 217 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 SLC9A1P19634 815 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 CXCR3P49682 368 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 TMPRSS3P57727 454 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 RNASE9P60153 205 aaKnown RBP17.08■□□□□ 0.32
MRPL55-220ENST00000411464 ERVPABLB-1P60509 514 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 RPS21P63220 83 aaKnown RBP17.08■□□□□ 0.32
MRPL55-220ENST00000411464 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-220ENST00000411464 GBP6Q6ZN66 633 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 SLC26A9Q7LBE3 791 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 PTAR1Q7Z6K3 402 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-220ENST00000411464 TFAP2DQ7Z6R9 452 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 SLC22A18ASQ8N1D0 253 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 DCAF4L2Q8NA75 395 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 MAPK15Q8TD08 544 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 SHC3Q92529 594 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 HIC2Q96JB3 615 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 FEM1CQ96JP0 617 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 SLC17A9Q9BYT1 436 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 ARHGEF38Q9NXL2 777 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.08■□□□□ 0.32
MRPL55-220ENST00000411464 STAP1Q9ULZ2 295 aa17.08■□□□□ 0.32
MRPL55-220ENST00000411464 A0A0D9SEW6 157 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 LEFTY1O75610 366 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 PAK4O96013 591 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-220ENST00000411464 OR1E1P30953 314 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 DNA2P51530 1060 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 RHDQ02161 417 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 TMEM259Q4ZIN3 620 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 ACBD5Q5T8D3 534 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-220ENST00000411464 RETSATQ6NUM9 610 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 C22orf39Q6P5X5 142 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 DPY19L3Q6ZPD9 716 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 ZDHHC17Q8IUH5 632 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 ZNF397Q8NF99 534 aaPredicted RBP17.07■□□□□ 0.32
MRPL55-220ENST00000411464 IFI44Q8TCB0 444 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 KCNE4Q8WWG9 221 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 BMFQ96LC9 184 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 C1orf74Q96LT6 269 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 NPY6RQ99463 290 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 SPON2Q9BUD6 331 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 THSD1Q9NS62 852 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 TMEM51Q9NW97 253 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 NCKIPSDQ9NZQ3 722 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 MPP6Q9NZW5 540 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 IPO11Q9UI26 975 aaKnown RBP17.07■□□□□ 0.32
MRPL55-220ENST00000411464 SNX10Q9Y5X0 201 aa17.07■□□□□ 0.32
MRPL55-220ENST00000411464 FLNBO75369 2602 aaKnown RBP17.07■□□□□ 0.32
MRPL55-220ENST00000411464 DRGXA6NNA5 263 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 H3BM21 787 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 RNF103O00237 685 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 KLK10O43240 276 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 NEBLO76041 1014 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 SULT1E1P49888 294 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 NEK3P51956 506 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 APBA1Q02410 837 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 DEUP1Q05D60 604 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 SLC20A2Q08357 652 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 SGCGQ13326 291 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 EXOC3L4Q17RC7 722 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 ARHGAP40Q5TG30 622 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 KIAA1161Q6NSJ0 714 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 ZCCHC8Q6NZY4 707 aaKnown RBP17.06■□□□□ 0.32
MRPL55-220ENST00000411464 PCSK4Q6UW60 755 aa17.06■□□□□ 0.32
MRPL55-220ENST00000411464 ZNF683Q8IZ20 524 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms