RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PIK3CGP48736 1102 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 UAP1L1Q3KQV9 507 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 PUS10Q3MIT2 529 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 TMC5Q6UXY8 1006 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SUGP1Q8IWZ8 645 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 GPR135Q8IZ08 494 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 APOL4Q9BPW4 351 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ASB8Q9H765 288 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 IMP3Q9NV31 184 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC7A2P52569 658 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SP3Q02447 781 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 FOXM1Q08050 763 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 PHYKPLQ8IUZ5 450 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 SCUBE1Q8IWY4 988 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 EPS8L3Q8TE67 593 aaKnown RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 CRELD1Q96HD1 420 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 MCCC1Q96RQ3 725 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 CCT8L2Q96SF2 557 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 ABCG8Q9H221 673 aa11.37□□□□□ -0.59
PRPF40A-202ENST00000410080 DDTLA6NHG4 134 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 GCATO75600 419 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 TSPAN9O75954 239 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CTDNEP1O95476 244 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 TOP3BO95985 862 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CXCR2P25025 360 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 WASP42768 502 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 MTA1Q13330 715 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 PCNX4Q63HM2 1172 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CRTC3Q6UUV7 619 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 FAM98AQ8NCA5 519 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 STX16-NPEPL1H3BU86 382 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 STX16O14662 325 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 OR7A10O76100 309 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ARMC3Q5W041 872 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 WDR49Q8IV35 697 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 C12orf50Q8NA57 414 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 DDHD1Q8NEL9 900 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 OR56A4Q8NGH8 313 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 DNAJC9Q8WXX5 260 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 DCLK3Q9C098 648 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 KLHL4Q9C0H6 718 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 OSER1Q9NX31 292 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 MRPS7Q9Y2R9 242 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 TRBV23OR9-2A0A075B6M9 112 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 FFAR2O15552 330 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 PGK1P00558 417 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 MBTD1Q05BQ5 628 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 EIF3MQ7L2H7 374 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CPA6Q8N4T0 437 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CENPIQ92674 756 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 RABGEF1Q9UJ41 708 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 OGDHLQ9ULD0 1010 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC26A4O43511 780 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 PLGP00747 810 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CD151P48509 253 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 GRB10Q13322 594 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 PFKFB4Q16877 469 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 XKR6Q5GH73 641 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ZNF470Q6ECI4 717 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 KCTD8Q6ZWB6 473 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC2A14Q8TDB8 520 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ZNF483Q8TF39 744 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 TRIM63Q969Q1 353 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 BDH2Q9BUT1 245 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ZFP14Q9HCL3 533 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 KCNQ5Q9NR82 932 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 KLQ9UEF7 1012 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 PHTF1Q9UMS5 762 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 FAM86B1E9PN63 330 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 NCAM2O15394 837 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CFIP05156 583 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ELFN1P0C7U0 828 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 AQP5P55064 265 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 NEDD8Q15843 81 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 SLC30A10Q6XR72 485 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 MIEF2Q96C03 454 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 RNF145Q96MT1 663 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 DEFB118Q96PH6 123 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CHMP1AQ9HD42 196 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 PPP2R3BQ9Y5P8 575 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ADGRA3Q8IWK6 1321 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 LACTBL1A8MY62 500 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 SEPT4O43236 478 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CTPS1P17812 591 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CCNG2Q16589 344 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 CDYL2Q8N8U2 506 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 RP9Q8TA86 221 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 LMLNQ96KR4 655 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ERP44Q9BS26 406 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 KCNF1Q9H3M0 494 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 LDAHQ9H6V9 325 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 TMEM150BA6NC51 233 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 SSNA1O43805 119 aa11.36□□□□□ -0.59
PRPF40A-202ENST00000410080 ADH1AP07327 375 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms