RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ANKRD6Q9Y2G4 727 aa16.14■□□□□ 0.17
HOXD3-202ENST00000410016 Q9Y3F1 56 aa16.14■□□□□ 0.17
HOXD3-202ENST00000410016 RAP2CQ9Y3L5 183 aa16.14■□□□□ 0.17
HOXD3-202ENST00000410016 COL4A4P53420 1690 aaPredicted RBP16.14■□□□□ 0.17
HOXD3-202ENST00000410016 CASTOR2A6NHX0 329 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 CABYRO75952 493 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 MT-CYBP00156 380 aaPredicted RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 APOA4P06727 396 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 SRGAP2BP0DMP2 458 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 TFEBP19484 476 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 CCNCP24863 283 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 MPSTP25325 297 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 PCSK1P29120 753 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 CCR10P46092 362 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 GRIA4P48058 902 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 SCNN1GP51170 649 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 MTTPP55157 894 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 MRPS6P82932 125 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 CUL3Q13618 768 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 HNRNPDQ14103 355 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 ARL13AQ5H913 290 aaPredicted RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 LIPMQ5VYY2 423 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 PKN3Q6P5Z2 889 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 CNTN4Q8IWV2 1026 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 CENPLQ8N0S6 344 aaPredicted RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 USP33Q8TEY7 942 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 SREK1Q8WXA9 508 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 CCDC124Q96CT7 223 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 CNDP1Q96KN2 507 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 YIPF3Q9GZM5 350 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 AP5M1Q9H0R1 490 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 WDR55Q9H6Y2 383 aaPredicted RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 NSMCE4AQ9NXX6 385 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 TLK1Q9UKI8 766 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 ADAMTS6Q9UKP5 1117 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 SSX2IPQ9Y2D8 614 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 HDAC3O15379 428 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 PSMD3O43242 534 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 BDNFP23560 247 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 ARNTP27540 789 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 ARCN1P48444 511 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 RPL14P50914 215 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 TBL3Q12788 808 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 USP10Q14694 798 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 FSCN1Q16658 493 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 PCID2Q5JVF3 399 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 MFSD6LQ8IWD5 586 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 SCML4Q8N228 414 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 EFCAB3Q8N7B9 438 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 SLC26A7Q8TE54 656 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 STYXQ8WUJ0 223 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 SPON1Q9HCB6 807 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 TMLHEQ9NVH6 421 aa16.13■□□□□ 0.17
HOXD3-202ENST00000410016 AAR2Q9Y312 384 aaKnown RBP16.13■□□□□ 0.17
HOXD3-202ENST00000410016 GRID2O43424 1007 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 RPL9P32969 192 aaKnown RBP16.12■□□□□ 0.17
HOXD3-202ENST00000410016 ASPHQ12797 758 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 LCA5Q86VQ0 697 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 LSMEM2Q8N112 164 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 FSTL5Q8N475 847 aaPredicted RBP16.12■□□□□ 0.17
HOXD3-202ENST00000410016 KCTD4Q8WVF5 259 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 JADE3Q92613 823 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 GPR78Q96P69 363 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 FCRL5Q96RD9 977 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 PKMYT1Q99640 499 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 IL12RB2Q99665 862 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 ACBD6Q9BR61 282 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 SYT17Q9BSW7 474 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 ZDHHC7Q9NXF8 308 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 ARHGEF38Q9NXL2 777 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 ZDHHC2Q9UIJ5 367 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 MID2Q9UJV3 735 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 RUVBL2Q9Y230 463 aaKnown RBP16.12■□□□□ 0.17
HOXD3-202ENST00000410016 SHROOM3Q8TF72 1996 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 GOLGA8QA0A0J9YX86 632 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 GOLGA8OA6NCC3 632 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 GOLGA8NF8WBI6 632 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 MAFKO60675 156 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 SAT1P21673 171 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 YY1P25490 414 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 CALRP27797 417 aaKnown RBP16.12■□□□□ 0.17
HOXD3-202ENST00000410016 NAGLUP54802 743 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 COG7P83436 770 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 LSM12Q3MHD2 195 aaKnown RBP16.12■□□□□ 0.17
HOXD3-202ENST00000410016 TCHHL1Q5QJ38 904 aaPredicted RBP16.12■□□□□ 0.17
HOXD3-202ENST00000410016 RNF220Q5VTB9 566 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 RWDD4Q6NW29 188 aaKnown RBP16.12■□□□□ 0.17
HOXD3-202ENST00000410016 KBTBD6Q86V97 674 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 DENND6AQ8IWF6 608 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 SCAMP5Q8TAC9 235 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 RNF34Q969K3 372 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 TBL1YQ9BQ87 522 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 FTHL17Q9BXU8 183 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 SIK2Q9H0K1 926 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 GIT1Q9Y2X7 761 aa16.12■□□□□ 0.17
HOXD3-202ENST00000410016 DFFAO00273 331 aa16.11■□□□□ 0.17
HOXD3-202ENST00000410016 DDHD2O94830 711 aa16.11■□□□□ 0.17
HOXD3-202ENST00000410016 PIGNO95427 931 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms