RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 GPR135Q8IZ08 494 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 FUKQ8N0W3 1084 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 C11orf65Q8NCR3 313 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 BEND2Q8NDZ0 799 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 LILRB1Q8NHL6 650 aaPredicted RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 KRT35Q92764 455 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 KCNJ9Q92806 393 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 EDAQ92838 391 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 DGAT2Q96PD7 388 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 LRRC37BQ96QE4 947 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 DPYSL5Q9BPU6 564 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 CPPED1Q9BRF8 314 aaPredicted RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 NAA11Q9BSU3 229 aaPredicted RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 MMADHCQ9H3L0 296 aaPredicted RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 ST6GALNAC4Q9H4F1 302 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 HPF1Q9NWY4 346 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 MTMR4Q9NYA4 1195 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 HSFX1Q9UBD0 423 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 FBXL17Q9UF56 701 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 TUBE1Q9UJT0 475 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 INTS6Q9UL03 887 aaKnown RBP5.15□□□□□ -1.59
LSM5-205ENST00000409952 PADI1Q9ULC6 663 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 KLHL20Q9Y2M5 609 aa5.15□□□□□ -1.59
LSM5-205ENST00000409952 TRAV34A0A0B4J273 112 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 A0A1W2PRG0 241 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 ARHGAP10A1A4S6 786 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 ZAR1LA6NP61 321 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 SCAMP1O15126 338 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 TRIM24O15164 1050 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 LIASO43766 372 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 TACC1O75410 805 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 IPO7O95373 1038 aaKnown RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 GALTP07902 379 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 CYP4B1P13584 511 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 GNAT2P19087 354 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 SP100P23497 879 aaPredicted RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 RPS19P39019 145 aaKnown RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 POLGP54098 1239 aaPredicted RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 PMS2P54278 862 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 IL1RL1Q01638 556 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 YWHAHQ04917 246 aaPredicted RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 LY6KQ17RY6 165 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 ZXDCQ2QGD7 858 aaPredicted RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 SMU1Q2TAY7 513 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 ASTE1Q2TB18 679 aaPredicted RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 COLEC12Q5KU26 742 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 MPP7Q5T2T1 576 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 CST9LP1Q5W188 147 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 KIAA0930Q6ICG6 404 aaPredicted RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 JADE1Q6IE81 842 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 NAPEPLDQ6IQ20 393 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 GJB7Q6PEY0 223 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 SUSD1Q6UWL2 747 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 CLNKQ7Z7G1 428 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 NLRP14Q86W24 1093 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 FAM109AQ8N4B1 249 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 MINDY1Q8N5J2 469 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 ENDOVQ8N8Q3 282 aaKnown RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 SHCBP1Q8NEM2 672 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 CHST13Q8NET6 341 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 OR52N2Q8NGI0 321 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 ATG4AQ8WYN0 398 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 MRPS27Q92552 414 aaKnown RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 TAF4BQ92750 862 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 TMCO6Q96DC7 493 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 VPS50Q96JG6 964 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 CCDC114Q96M63 670 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 CFAP57Q96MR6 1250 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 ATP6V0BQ99437 205 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 FSD1Q9BTV5 496 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 PLA2G12BQ9BX93 195 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 AGO3Q9H9G7 860 aaKnown RBP5.14□□□□□ -1.59
LSM5-205ENST00000409952 C20orf141Q9NUB4 165 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 NCKIPSDQ9NZQ3 722 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 CACNG4Q9UBN1 327 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 BLOC1S6Q9UL45 172 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 NENFQ9UMX5 172 aa5.14□□□□□ -1.59
LSM5-205ENST00000409952 LOC100509620A0A075B734 347 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 TCRBV21S2A2A0A5A6 115 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 TRIM64CA6NLI5 447 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 LRRC53A6NM62 1247 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 TRIAP1O43715 76 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 ZBTB14O43829 449 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 CCNT1O60563 726 aaKnown RBP5.13□□□□□ -1.59
LSM5-205ENST00000409952 KERAO60938 352 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 RECQL4O94761 1208 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 RECQL5O94762 991 aaPredicted RBP5.13□□□□□ -1.59
LSM5-205ENST00000409952 FYNP06241 537 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 TNFRSF1AP19438 455 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 PRPH2P23942 346 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 FMO4P31512 558 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 HSD17B7P56937 341 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 SCN1BQ07699 218 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 ACTN3Q08043 901 aaPredicted RBP5.13□□□□□ -1.59
LSM5-205ENST00000409952 C17orf67Q0P5P2 114 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 SLC14A1Q13336 389 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 GPR162Q16538 588 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 SLC18A3Q16572 532 aa5.13□□□□□ -1.59
LSM5-205ENST00000409952 TYSND1Q2T9J0 566 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms