RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 C3orf62Q6ZUJ4 267 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 OTOP3Q7RTS5 596 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 ADGRD2Q7Z7M1 963 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 PALM2Q8IXS6 379 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 HJURPQ8NCD3 748 aaPredicted RBP5.62□□□□□ -1.51
EPHA4-202ENST00000409854 FBF1Q8TES7 1133 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 IMP4Q96G21 291 aaKnown RBP5.62□□□□□ -1.51
EPHA4-202ENST00000409854 XPO6Q96QU8 1125 aaKnown RBP5.62□□□□□ -1.51
EPHA4-202ENST00000409854 NAT9Q9BTE0 207 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 PBX4Q9BYU1 374 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 PRKD2Q9BZL6 878 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 SLC25A51Q9H1U9 297 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 ATP13A1Q9HD20 1204 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 RBM22Q9NW64 420 aaKnown RBP eCLIP5.62□□□□□ -1.51
EPHA4-202ENST00000409854 PSD3Q9NYI0 1048 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 ZC3H7BQ9UGR2 993 aaKnown RBP5.62□□□□□ -1.51
EPHA4-202ENST00000409854 LSM7Q9UK45 103 aaKnown RBP5.62□□□□□ -1.51
EPHA4-202ENST00000409854 NOVA2Q9UNW9 492 aaKnown RBP5.62□□□□□ -1.51
EPHA4-202ENST00000409854 HCFC2Q9Y5Z7 792 aa5.62□□□□□ -1.51
EPHA4-202ENST00000409854 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CCDC189A1A4V9 331 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 XYLBO75191 536 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ALDH1A2O94788 518 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CPP00450 1065 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CKMP06732 381 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MMP2P08253 660 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ATP5DP30049 168 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 PBX2P40425 430 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 GYS2P54840 703 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 GEMIN4P57678 1058 aaKnown RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SLC10A7Q0GE19 358 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MPP3Q13368 585 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SKIDA1Q1XH10 827 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SLC5A9Q2M3M2 681 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 TMCO4Q5TGY1 634 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MARC1Q5VT66 337 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 NAPEPLDQ6IQ20 393 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ADGRD1Q6QNK2 874 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 LINC00523Q86TU6 105 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 PGBD5Q8N414 524 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 GSDMBQ8TAX9 411 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MICAL1Q8TDZ2 1067 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 USP33Q8TEY7 942 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 STAMBPL1Q96FJ0 436 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 TASP1Q9H6P5 420 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MOCS1Q9NZB8 636 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CTNNAL1Q9UBT7 734 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 OR51B4Q9Y5P0 310 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ACTL7BQ9Y614 415 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MYOFQ9NZM1 2061 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MUC22E2RYF6 1773 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 A0A0D9SEW6 157 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CXorf51AA0A1B0GTR3 108 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 E2F8A0AVK6 867 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 F5H423 210 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 LEFTY2O00292 366 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SHOX2O60902 331 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 LUC7L3O95232 432 aaKnown RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 GJA1P17302 382 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 PGAM1P18669 254 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MGAT1P26572 445 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 WEE1P30291 646 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ETFBP38117 255 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SLCO1A2P46721 670 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 NPY2RP49146 381 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MAGOHP61326 146 aaKnown RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 PPP2R2AP63151 447 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 USP4Q13107 963 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ZNF177Q13360 481 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MTM1Q13496 603 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SPARCL1Q14515 664 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 RFTN1Q14699 578 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 LBRQ14739 615 aaKnown RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 EFTUD2Q15029 972 aaKnown RBP eCLIP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 RAB30Q15771 203 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 DENND5AQ6IQ26 1287 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 PRPF39Q86UA1 669 aaKnown RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CMTM8Q8IZV2 173 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 KIAA1958Q8N8K9 716 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 OR52K1Q8NGK4 314 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ARRDC2Q8TBH0 407 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 MZB1Q8WU39 189 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 DCAKDQ8WVC6 231 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 TCEAL4Q96EI5 215 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ALG14Q96F25 216 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CYTH2Q99418 400 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 TBL1YQ9BQ87 522 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 ARNT2Q9HBZ2 717 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 VPS45Q9NRW7 570 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 SYBUQ9NX95 663 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CFAP97Q9P2B7 532 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 PSMC3IPQ9P2W1 217 aaPredicted RBP5.61□□□□□ -1.51
EPHA4-202ENST00000409854 CHD7Q9P2D1 2997 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 TLDC2A0PJX2 215 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 FAM159BA6NKW6 160 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 FAM155BO75949 473 aa5.61□□□□□ -1.51
EPHA4-202ENST00000409854 RHOCP08134 193 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms