RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 C11orf70Q9BRQ4 267 aa15.06■□□□□ 0
CBX3-203ENST00000409747 HDAC8Q9BY41 377 aa15.06■□□□□ 0
CBX3-203ENST00000409747 NLRC4Q9NPP4 1024 aa15.06■□□□□ 0
CBX3-203ENST00000409747 DKK4Q9UBT3 224 aa15.06■□□□□ 0
CBX3-203ENST00000409747 ZNF212Q9UDV6 495 aa15.06■□□□□ 0
CBX3-203ENST00000409747 DSPP15924 2871 aaKnown RBP15.06■□□□□ 0
CBX3-203ENST00000409747 PKD1L2Q7Z442 2459 aa15.06■□□□□ 0
CBX3-203ENST00000409747 SMAD6O43541 496 aaKnown RBP15.06■□□□□ 0
CBX3-203ENST00000409747 RFPL3O75679 317 aa15.06■□□□□ 0
CBX3-203ENST00000409747 AKT2P31751 481 aa15.06■□□□□ 0
CBX3-203ENST00000409747 HNF1BP35680 557 aa15.06■□□□□ 0
CBX3-203ENST00000409747 PTPN9P43378 593 aa15.06■□□□□ 0
CBX3-203ENST00000409747 MAPKAPK2P49137 400 aa15.06■□□□□ 0
CBX3-203ENST00000409747 KLK7P49862 253 aa15.06■□□□□ 0
CBX3-203ENST00000409747 CDO1Q16878 200 aa15.06■□□□□ 0
CBX3-203ENST00000409747 TMPRSS12Q86WS5 348 aa15.06■□□□□ 0
CBX3-203ENST00000409747 HORMAD1Q86X24 394 aa15.06■□□□□ 0
CBX3-203ENST00000409747 DRC7Q8IY82 874 aa15.06■□□□□ 0
CBX3-203ENST00000409747 EID2Q8N6I1 236 aa15.06■□□□□ 0
CBX3-203ENST00000409747 NEK11Q8NG66 645 aa15.06■□□□□ 0
CBX3-203ENST00000409747 RXFP2Q8WXD0 754 aa15.06■□□□□ 0
CBX3-203ENST00000409747 KLHDC7BQ96G42 594 aa15.06■□□□□ 0
CBX3-203ENST00000409747 PCMTD1Q96MG8 357 aaPredicted RBP15.06■□□□□ 0
CBX3-203ENST00000409747 TNKS2Q9H2K2 1166 aa15.06■□□□□ 0
CBX3-203ENST00000409747 ANO10Q9NW15 660 aa15.06■□□□□ 0
CBX3-203ENST00000409747 OR12D3Q9UGF7 316 aa15.06■□□□□ 0
CBX3-203ENST00000409747 ANKRD11Q6UB99 2663 aaPredicted RBP15.05■□□□□ 0
CBX3-203ENST00000409747 A0A1W2PQU0 124 aa15.05■□□□□ -0
CBX3-203ENST00000409747 GOLGA6L22H0YM25 854 aa15.05■□□□□ -0
CBX3-203ENST00000409747 GLDCP23378 1020 aa15.05■□□□□ -0
CBX3-203ENST00000409747 ADRA1BP35368 520 aa15.05■□□□□ -0
CBX3-203ENST00000409747 NEK3P51956 506 aa15.05■□□□□ -0
CBX3-203ENST00000409747 GSCP56915 257 aaPredicted RBP15.05■□□□□ -0
CBX3-203ENST00000409747 MYL5Q02045 173 aa15.05■□□□□ -0
CBX3-203ENST00000409747 CCDC14Q49A88 953 aa15.05■□□□□ -0
CBX3-203ENST00000409747 ARSIQ5FYB1 569 aa15.05■□□□□ -0
CBX3-203ENST00000409747 SFMBT2Q5VUG0 894 aa15.05■□□□□ -0
CBX3-203ENST00000409747 RWDD4Q6NW29 188 aaKnown RBP15.05■□□□□ -0
CBX3-203ENST00000409747 DHRS13Q6UX07 377 aa15.05■□□□□ -0
CBX3-203ENST00000409747 DPY19L3Q6ZPD9 716 aa15.05■□□□□ -0
CBX3-203ENST00000409747 ZSCAN30Q86W11 494 aa15.05■□□□□ -0
CBX3-203ENST00000409747 SPATS2Q86XZ4 545 aaKnown RBP15.05■□□□□ -0
CBX3-203ENST00000409747 TMEM145Q8NBT3 493 aa15.05■□□□□ -0
CBX3-203ENST00000409747 CHST14Q8NCH0 376 aa15.05■□□□□ -0
CBX3-203ENST00000409747 FAM174AQ8TBP5 190 aa15.05■□□□□ -0
CBX3-203ENST00000409747 ARRDC3Q96B67 414 aa15.05■□□□□ -0
CBX3-203ENST00000409747 OSBPL2Q9H1P3 480 aa15.05■□□□□ -0
CBX3-203ENST00000409747 FANCLQ9NW38 375 aa15.05■□□□□ -0
CBX3-203ENST00000409747 SIK3Q9Y2K2 1263 aa15.05■□□□□ -0
CBX3-203ENST00000409747 C2CD4BA6NLJ0 364 aa15.04■□□□□ -0
CBX3-203ENST00000409747 LGALS16A8MUM7 142 aa15.04■□□□□ -0
CBX3-203ENST00000409747 TAF4O00268 1085 aa15.04■□□□□ -0
CBX3-203ENST00000409747 LEFTY1O75610 366 aa15.04■□□□□ -0
CBX3-203ENST00000409747 ZMPSTE24O75844 475 aa15.04■□□□□ -0
CBX3-203ENST00000409747 PCDH8O95206 1070 aa15.04■□□□□ -0
CBX3-203ENST00000409747 CALB1P05937 261 aa15.04■□□□□ -0
CBX3-203ENST00000409747 KRT3P12035 628 aa15.04■□□□□ -0
CBX3-203ENST00000409747 RHOQP17081 205 aa15.04■□□□□ -0
CBX3-203ENST00000409747 CHRNB2P17787 502 aa15.04■□□□□ -0
CBX3-203ENST00000409747 HNRNPA2B1P22626 353 aaKnown RBP15.04■□□□□ -0
CBX3-203ENST00000409747 ITGB7P26010 798 aa15.04■□□□□ -0
CBX3-203ENST00000409747 COPB1P53618 953 aaKnown RBP15.04■□□□□ -0
CBX3-203ENST00000409747 ILKQ13418 452 aa15.04■□□□□ -0
CBX3-203ENST00000409747 STX1AQ16623 288 aa15.04■□□□□ -0
CBX3-203ENST00000409747 C15orf59Q2T9L4 293 aaPredicted RBP15.04■□□□□ -0
CBX3-203ENST00000409747 MANEALQ5VSG8 457 aa15.04■□□□□ -0
CBX3-203ENST00000409747 PDCD7Q8N8D1 485 aaKnown RBP15.04■□□□□ -0
CBX3-203ENST00000409747 SLC30A5Q8TAD4 765 aa15.04■□□□□ -0
CBX3-203ENST00000409747 MDM1Q8TC05 714 aa15.04■□□□□ -0
CBX3-203ENST00000409747 ISG20Q96AZ6 181 aaKnown RBP15.04■□□□□ -0
CBX3-203ENST00000409747 HEPHQ9BQS7 1158 aa15.04■□□□□ -0
CBX3-203ENST00000409747 SELENOOQ9BVL4 669 aa15.04■□□□□ -0
CBX3-203ENST00000409747 ADAM22Q9P0K1 906 aa15.04■□□□□ -0
CBX3-203ENST00000409747 LIMA1Q9UHB6 759 aaKnown RBP15.04■□□□□ -0
CBX3-203ENST00000409747 HPCAL4Q9UM19 191 aa15.04■□□□□ -0
CBX3-203ENST00000409747 EPHB6O15197 1021 aa15.03■□□□□ -0
CBX3-203ENST00000409747 SLC31A1O15431 190 aa15.03■□□□□ -0
CBX3-203ENST00000409747 THEGLP0DJG4 465 aa15.03■□□□□ -0
CBX3-203ENST00000409747 UNGP13051 313 aaPredicted RBP15.03■□□□□ -0
CBX3-203ENST00000409747 ACADVLP49748 655 aa15.03■□□□□ -0
CBX3-203ENST00000409747 DNA2P51530 1060 aa15.03■□□□□ -0
CBX3-203ENST00000409747 ARF5P84085 180 aa15.03■□□□□ -0
CBX3-203ENST00000409747 ZNF284Q2VY69 593 aa15.03■□□□□ -0
CBX3-203ENST00000409747 HS1BP3Q53T59 392 aa15.03■□□□□ -0
CBX3-203ENST00000409747 CARD16Q5EG05 197 aa15.03■□□□□ -0
CBX3-203ENST00000409747 ARTNQ5T4W7 220 aa15.03■□□□□ -0
CBX3-203ENST00000409747 KIAA1161Q6NSJ0 714 aa15.03■□□□□ -0
CBX3-203ENST00000409747 PLPP6Q8IY26 295 aa15.03■□□□□ -0
CBX3-203ENST00000409747 C3orf20Q8ND61 904 aa15.03■□□□□ -0
CBX3-203ENST00000409747 GPT2Q8TD30 523 aa15.03■□□□□ -0
CBX3-203ENST00000409747 FAM172AQ8WUF8 416 aa15.03■□□□□ -0
CBX3-203ENST00000409747 CENPIQ92674 756 aaPredicted RBP15.03■□□□□ -0
CBX3-203ENST00000409747 TBC1D31Q96DN5 1066 aa15.03■□□□□ -0
CBX3-203ENST00000409747 TMEM248Q9NWD8 314 aa15.03■□□□□ -0
CBX3-203ENST00000409747 LHX6Q9UPM6 363 aa15.03■□□□□ -0
CBX3-203ENST00000409747 WASF2Q9Y6W5 498 aa15.03■□□□□ -0
CBX3-203ENST00000409747 LAMA5O15230 3695 aa15.03■□□□□ -0
CBX3-203ENST00000409747 ANKRD62A6NC57 917 aa15.03■□□□□ -0
CBX3-203ENST00000409747 ZNF821O75541 412 aaPredicted RBP15.03■□□□□ -0
CBX3-203ENST00000409747 CCDC172P0C7W6 258 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms