RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZNF333Q96JL9 665 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 NTPCRQ9BSD7 190 aaKnown RBP4.42□□□□□ -1.7
PMS1-203ENST00000409593 DCLK3Q9C098 648 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 PLK2Q9NYY3 685 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 OSGIN2Q9Y236 505 aa4.42□□□□□ -1.7
PMS1-203ENST00000409593 MORC2Q9Y6X9 1032 aaPredicted RBP4.42□□□□□ -1.7
PMS1-203ENST00000409593 TARSL2A2RTX5 802 aaKnown RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 OR6C75A6NL08 312 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 C17orf100A8MU93 164 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 INAFM1C9JVW0 142 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 RNMTO43148 476 aaKnown RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 SPRY3O43610 288 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 LIASO43766 372 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 DHRS4L1P0CG22 281 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 HOXB6P17509 224 aaKnown RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 MLH1P40692 756 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 GPS2Q13227 327 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 DUSP6Q16828 381 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 CTXN3Q4LDR2 81 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 FNBP1LQ5T0N5 605 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 MEPCEQ7L2J0 689 aaKnown RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 BICD2Q8TD16 824 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 HDAC7Q8WUI4 952 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 NCSTNQ92542 709 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 LHPPQ9H008 270 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 KLHL31Q9H511 634 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 ZNF580Q9UK33 172 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 PCDHA7Q9UN72 937 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 CKAP5Q14008 2032 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 MST1RQ04912 1400 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 C17orf102A2RUQ5 167 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 OR6C68A6NDL8 312 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 MS4A18H0YCH9 400 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 I6L893 689 aaPredicted RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 LCATP04180 440 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 TNNT1P13805 278 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 PTPN9P43378 593 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 MTNR1AP48039 350 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 RFX5P48382 616 aaPredicted RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 CDH12P55289 794 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 ZP1P60852 638 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 PKP1Q13835 747 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 DNTTIP2Q5QJE6 756 aaKnown RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 SH2D4BQ5SQS7 431 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 Q6ZSV7 163 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 TRILQ7L0X0 811 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 SERPINA11Q86U17 422 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 TRIM74Q86UV6 250 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 TRIM73Q86UV7 250 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 GHDCQ8N2G8 530 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 PRR26Q8N8Z3 221 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 SPPL3Q8TCT6 385 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 ATOH1Q92858 354 aaPredicted RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 NEUROG1Q92886 237 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 TBC1D20Q96BZ9 403 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 PPP1R10Q96QC0 940 aaKnown RBP4.41□□□□□ -1.7
PMS1-203ENST00000409593 CXorf56Q9H5V9 222 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 ITM2CQ9NQX7 267 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 SEL1LQ9UBV2 794 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 DNAJC16Q9Y2G8 782 aa4.41□□□□□ -1.7
PMS1-203ENST00000409593 HSPB6O14558 160 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 ANP32CO43423 234 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 CLDN7O95471 211 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 IL1AP01583 271 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 MYZAPP0CAP1 466 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 CD72P21854 359 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 CCKBRP32239 447 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 GJC1P36383 396 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 DPP6P42658 865 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 PCYT1AP49585 367 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 PAPOLAP51003 745 aaKnown RBP4.4□□□□□ -1.71
PMS1-203ENST00000409593 PMS2P54278 862 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 FSCBQ5H9T9 825 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 CBWD5Q5RIA9 395 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 NKAPQ8N5F7 415 aaKnown RBP4.4□□□□□ -1.71
PMS1-203ENST00000409593 SLC35F5Q8WV83 523 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 RNFT2Q96EX2 444 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 COG8Q96MW5 612 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 PPCSQ9HAB8 311 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 GRHL1Q9NZI5 618 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 SUFUQ9UMX1 484 aa4.4□□□□□ -1.71
PMS1-203ENST00000409593 TRIP12Q14669 1992 aaPredicted RBP4.39□□□□□ -1.71
PMS1-203ENST00000409593 MMP3P08254 477 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 ACAA1P09110 424 aaPredicted RBP4.39□□□□□ -1.71
PMS1-203ENST00000409593 YWHAQP27348 245 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 ZXDBP98169 803 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 UBAP2Q5T6F2 1119 aaKnown RBP4.39□□□□□ -1.71
PMS1-203ENST00000409593 PDXDC1Q6P996 788 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 ZNF367Q7RTV3 350 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 MIGA1Q8NAN2 632 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 MASTLQ96GX5 879 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 GFM1Q96RP9 751 aaKnown RBP4.39□□□□□ -1.71
PMS1-203ENST00000409593 NOD2Q9HC29 1040 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 GDAQ9Y2T3 454 aa4.39□□□□□ -1.71
PMS1-203ENST00000409593 EYA2O00167 538 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 VWA5AO00534 786 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 PEX12O00623 359 aa4.38□□□□□ -1.71
PMS1-203ENST00000409593 LDB2O43679 373 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms