RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 RNF34Q969K3 372 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 ATXN7L3BQ96GX2 97 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 SLC2A13Q96QE2 648 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 FARP1Q9Y4F1 1045 aaPredicted RBP17.3■□□□□ 0.36
SCRN1-203ENST00000409570 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
SCRN1-203ENST00000409570 PMS2P1A4D2B8 440 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 POM121BA6NF01 834 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 CDRT15L2A8MXV6 281 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 P4HA2O15460 535 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 ARHGAP6O43182 974 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 SMAD6O43541 496 aaKnown RBP17.29■□□□□ 0.36
SCRN1-203ENST00000409570 SLC28A2O43868 658 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 CLDN11O75508 207 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 RBMS1P29558 406 aaKnown RBP17.29■□□□□ 0.36
SCRN1-203ENST00000409570 GUSBP11Q6P575 273 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 KYAT3Q6YP21 454 aaKnown RBP17.29■□□□□ 0.36
SCRN1-203ENST00000409570 EFL1Q7Z2Z2 1120 aaKnown RBP17.29■□□□□ 0.36
SCRN1-203ENST00000409570 ATP11CQ8NB49 1132 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 EHBP1Q8NDI1 1231 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 GRAMD1AQ96CP6 724 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 CCDC114Q96M63 670 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 CEP63Q96MT8 703 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 GSDMAQ96QA5 445 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 HDAC8Q9BY41 377 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 MUC3BQ9H195 1237 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 DYRK4Q9NR20 520 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 VPS51Q9UID3 782 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 KLF15Q9UIH9 416 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 PCDHGA8Q9Y5G5 932 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 CSNK1G3Q9Y6M4 447 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 UNC13CQ8NB66 2214 aa17.29■□□□□ 0.36
SCRN1-203ENST00000409570 TLN1Q9Y490 2541 aaKnown RBP17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CHD5Q8TDI0 1954 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 SPTY2D1-AS1A0A0U1RR47 76 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CPED1A4D0V7 1026 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 RAD51BO15315 384 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 MED7O43513 233 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CNTN5O94779 1100 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 LETM1O95202 739 aaPredicted RBP17.28■□□□□ 0.36
SCRN1-203ENST00000409570 WISP1O95388 367 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CSF2P04141 144 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 PRNPP04156 253 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 KRT5P13647 590 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 NME1P15531 152 aaKnown RBP17.28■□□□□ 0.36
SCRN1-203ENST00000409570 RRM1P23921 792 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CDH4P55283 916 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 KRT83P78385 493 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CETN1Q12798 172 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 PDCLQ13371 301 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CCDC40Q4G0X9 1142 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 ARSIQ5FYB1 569 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CCDC97Q96F63 343 aaPredicted RBP17.28■□□□□ 0.36
SCRN1-203ENST00000409570 CCDC34Q96HJ3 373 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 ACP6Q9NPH0 428 aa17.28■□□□□ 0.36
SCRN1-203ENST00000409570 EME2A4GXA9 379 aaPredicted RBP17.27■□□□□ 0.36
SCRN1-203ENST00000409570 PAGE1O75459 146 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 PAK4O96013 591 aaPredicted RBP17.27■□□□□ 0.36
SCRN1-203ENST00000409570 GLI1P08151 1106 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 CLN3Q13286 438 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 ALFQ53S48 1182 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 TPRG1LQ5T0D9 272 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 CRTC1Q6UUV9 634 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 RBM44Q6ZP01 1051 aaKnown RBP17.27■□□□□ 0.36
SCRN1-203ENST00000409570 PARGQ86W56 976 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 WDTC1Q8N5D0 677 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 SPATA20Q8TB22 786 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 GRIN3AQ8TCU5 1115 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 CPXM1Q96SM3 734 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 C2orf49Q9BVC5 232 aaPredicted RBP17.27■□□□□ 0.36
SCRN1-203ENST00000409570 SLC17A9Q9BYT1 436 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 SCAND2PQ9GZW5 306 aaPredicted RBP17.27■□□□□ 0.36
SCRN1-203ENST00000409570 ASNSD1Q9NWL6 643 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 IL36AQ9UHA7 158 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 SALL4Q9UJQ4 1053 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 WASF2Q9Y6W5 498 aa17.27■□□□□ 0.36
SCRN1-203ENST00000409570 BSNQ9UPA5 3926 aa17.27■□□□□ 0.35
SCRN1-203ENST00000409570 DOPEY2Q9Y3R5 2298 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 COL12A1Q99715 3063 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 H3BM21 787 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 CASC3O15234 703 aaKnown RBP17.26■□□□□ 0.35
SCRN1-203ENST00000409570 AQP9O43315 295 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 THAP12O43422 761 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 HSF2BPO75031 334 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 GRAP2O75791 330 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 RHOCP08134 193 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 GNA15P30679 374 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 RPS21P63220 83 aaKnown RBP17.26■□□□□ 0.35
SCRN1-203ENST00000409570 NME3Q13232 169 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 MTA1Q13330 715 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
SCRN1-203ENST00000409570 DRAP1Q14919 205 aaPredicted RBP17.26■□□□□ 0.35
SCRN1-203ENST00000409570 DEFB133Q30KQ1 61 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 PERM1Q5SV97 790 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 KIAA1161Q6NSJ0 714 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 C22orf39Q6P5X5 142 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 LINGO4Q6UY18 593 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 CCDC81Q6ZN84 652 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 CLEC14AQ86T13 490 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 ZNF683Q8IZ20 524 aa17.26■□□□□ 0.35
SCRN1-203ENST00000409570 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms