RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PPHLN1Q8NEY8 458 aaKnown RBP21.04■□□□□ 0.96
USP39-203ENST00000409470 ZNF461Q8TAF7 563 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 OVCA2Q8WZ82 227 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 FATE1Q969F0 183 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 VWCEQ96DN2 955 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 ATXN7L3BQ96GX2 97 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 MECRQ9BV79 373 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 SLC25A51Q9H1U9 297 aa21.04■□□□□ 0.96
USP39-203ENST00000409470 TOP3BO95985 862 aaKnown RBP21.03■□□□□ 0.96
USP39-203ENST00000409470 ALDH3A1P30838 453 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 SLC10A7Q0GE19 358 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 PDE1CQ14123 709 aaPredicted RBP21.03■□□□□ 0.96
USP39-203ENST00000409470 PARP15Q460N3 678 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 HECTD3Q5T447 861 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 NUDCD3Q8IVD9 361 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 FITM2Q8N6M3 262 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 MRGPRX2Q96LB1 330 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 ZNF778Q96MU6 729 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 SLC12A4Q9UP95 1085 aa21.03■□□□□ 0.96
USP39-203ENST00000409470 ZNF840PA6NDX5 716 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 GLRA3O75311 464 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 ALDH1A3P47895 512 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 MAPKAPK2P49137 400 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 HARS2P49590 506 aaKnown RBP21.02■□□□□ 0.96
USP39-203ENST00000409470 MAXP61244 160 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 PDPK2PQ6A1A2 396 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 KYAT3Q6YP21 454 aaKnown RBP21.02■□□□□ 0.96
USP39-203ENST00000409470 DCLK2Q8N568 766 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 AZIN2Q96A70 460 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 MYEOVQ96EZ4 313 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 ATXN3LQ9H3M9 355 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 ZNF212Q9UDV6 495 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 DCDC2Q9UHG0 476 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 ABHD14A-ACY1A0A1B0GW23 586 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 GOLGA8TH3BQL2 631 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 ACSL4O60488 711 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 ABLIM3O94929 683 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 GJB5O95377 273 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 SLC11A2P49281 568 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 LIMK2P53671 638 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 WNT3AP56704 352 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 IRX4P78413 519 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 DSG1Q02413 1049 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 SETDB1Q15047 1291 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 SNX30Q5VWJ9 437 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 TPGS2Q68CL5 300 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 POTEHQ6S545 545 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 SLC39A11Q8N1S5 342 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 CFAP52Q8N1V2 620 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 C10orf82Q8WW14 230 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 TRPM5Q9NZQ8 1165 aa21.02■□□□□ 0.96
USP39-203ENST00000409470 KLF11O14901 512 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 F7P08709 466 aaPredicted RBP21.01■□□□□ 0.95
USP39-203ENST00000409470 HMGA1P17096 107 aaKnown RBP21.01■□□□□ 0.95
USP39-203ENST00000409470 YBEYP58557 167 aaPredicted RBP21.01■□□□□ 0.95
USP39-203ENST00000409470 DEFB103AP81534 67 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 TMPRSS15P98073 1019 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 IL10RBQ08334 325 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 BTG3Q14201 252 aaPredicted RBP21.01■□□□□ 0.95
USP39-203ENST00000409470 ATG16L1Q676U5 607 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 RFWD3Q6PCD5 774 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 RANBP10Q6VN20 620 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 CCDC117Q8IWD4 279 aaPredicted RBP21.01■□□□□ 0.95
USP39-203ENST00000409470 E2F7Q96AV8 911 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 IMP4Q96G21 291 aaKnown RBP21.01■□□□□ 0.95
USP39-203ENST00000409470 TRIM55Q9BYV6 548 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 SNX15Q9NRS6 342 aa21.01■□□□□ 0.95
USP39-203ENST00000409470 CCDC195A0A1B0GUA6 201 aa21■□□□□ 0.95
USP39-203ENST00000409470 COCHO43405 550 aa21■□□□□ 0.95
USP39-203ENST00000409470 CD86P42081 329 aa21■□□□□ 0.95
USP39-203ENST00000409470 SERPINB8P50452 374 aa21■□□□□ 0.95
USP39-203ENST00000409470 SERINC3Q13530 473 aa21■□□□□ 0.95
USP39-203ENST00000409470 CHI3L2Q15782 390 aa21■□□□□ 0.95
USP39-203ENST00000409470 GALNTL6Q49A17 601 aa21■□□□□ 0.95
USP39-203ENST00000409470 PPM1JQ5JR12 505 aa21■□□□□ 0.95
USP39-203ENST00000409470 STXBP5Q5T5C0 1151 aa21■□□□□ 0.95
USP39-203ENST00000409470 N4BP2L1Q5TBK1 243 aaPredicted RBP21■□□□□ 0.95
USP39-203ENST00000409470 FSTL4Q6MZW2 842 aa21■□□□□ 0.95
USP39-203ENST00000409470 C16orf46Q6P387 395 aa21■□□□□ 0.95
USP39-203ENST00000409470 KDELC1Q6UW63 502 aa21■□□□□ 0.95
USP39-203ENST00000409470 SLC25A41Q8N5S1 370 aa21■□□□□ 0.95
USP39-203ENST00000409470 ZNF689Q96CS4 500 aaPredicted RBP21■□□□□ 0.95
USP39-203ENST00000409470 NSMCE4AQ9NXX6 385 aa21■□□□□ 0.95
USP39-203ENST00000409470 SIRPGQ9P1W8 387 aa21■□□□□ 0.95
USP39-203ENST00000409470 HSFX1Q9UBD0 423 aa21■□□□□ 0.95
USP39-203ENST00000409470 DCTN4Q9UJW0 460 aa21■□□□□ 0.95
USP39-203ENST00000409470 TCAF1Q9Y4C2 921 aa21■□□□□ 0.95
USP39-203ENST00000409470 YIPF1Q9Y548 306 aa21■□□□□ 0.95
USP39-203ENST00000409470 BIRC5O15392 142 aa21■□□□□ 0.95
USP39-203ENST00000409470 TIMM44O43615 452 aa21■□□□□ 0.95
USP39-203ENST00000409470 DCTN3O75935 186 aa21■□□□□ 0.95
USP39-203ENST00000409470 BPGMP07738 259 aa21■□□□□ 0.95
USP39-203ENST00000409470 SLC6A4P31645 630 aa21■□□□□ 0.95
USP39-203ENST00000409470 ACVRL1P37023 503 aa21■□□□□ 0.95
USP39-203ENST00000409470 ETFBP38117 255 aa21■□□□□ 0.95
USP39-203ENST00000409470 CHRNA4P43681 627 aa21■□□□□ 0.95
USP39-203ENST00000409470 CSE1LP55060 971 aaKnown RBP21■□□□□ 0.95
USP39-203ENST00000409470 DSC2Q02487 901 aa21■□□□□ 0.95
USP39-203ENST00000409470 CCDC15Q0P6D6 951 aa21■□□□□ 0.95
USP39-203ENST00000409470 PLD1Q13393 1074 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms