RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 CNOT8Q9UFF9 292 aaKnown RBP13.21□□□□□ -0.29
SUMO1-206ENST00000409368 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.29
SUMO1-206ENST00000409368 ZSCAN5CA6NGD5 496 aaPredicted RBP13.2□□□□□ -0.3
SUMO1-206ENST00000409368 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 C1QTNF3-AMACRE9PGA6 284 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 KDELR3O43731 214 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 RAMP2O60895 175 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 RNASEH2AO75792 299 aaKnown RBP13.2□□□□□ -0.3
SUMO1-206ENST00000409368 KCNK5O95279 499 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 IL1BP01584 269 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 PRNPP04156 253 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 CTSLP07711 333 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 CEACAM1P13688 526 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 GLDCP23378 1020 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 CHRNA3P32297 505 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 ACVRL1P37023 503 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 PSMD8P48556 350 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 HCAR3P49019 387 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 RACK1P63244 317 aaKnown RBP13.2□□□□□ -0.3
SUMO1-206ENST00000409368 GRIK2Q13002 908 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 TRIM14Q14142 442 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 INO80DQ53TQ3 878 aaPredicted RBP13.2□□□□□ -0.3
SUMO1-206ENST00000409368 NEK5Q6P3R8 708 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 NCEH1Q6PIU2 408 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 IL27RAQ6UWB1 636 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 VPS36Q86VN1 386 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 PYROXD2Q8N2H3 581 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 HDDC3Q8N4P3 179 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 ZCCHC9Q8N567 271 aaKnown RBP13.2□□□□□ -0.3
SUMO1-206ENST00000409368 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 NIPA2Q8N8Q9 360 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 PIP4K2CQ8TBX8 421 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 CASKIN2Q8WXE0 1202 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 ZNF653Q96CK0 615 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 HDAC8Q9BY41 377 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 TSPY26PQ9H489 355 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 TM9SF3Q9HD45 589 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 ARHGAP20Q9P2F6 1191 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 SLCO1B1Q9Y6L6 691 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 WASF2Q9Y6W5 498 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 TMEM131Q92545 1883 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 EPG5Q9HCE0 2579 aa13.2□□□□□ -0.3
SUMO1-206ENST00000409368 TRPM6Q9BX84 2022 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 A0A087X0T9 212 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 CBX4O00257 560 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 LRCH4O75427 683 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 CYP1A2P05177 515 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 FAM228BP0C875 321 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 CD59P13987 128 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 PSMA2P25787 234 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 EPHB2P29323 1055 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 MIPP30301 263 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 CASP14P31944 242 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 METAP1P53582 386 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 TAS2R38P59533 333 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 POLD3Q15054 466 aaPredicted RBP13.19□□□□□ -0.3
SUMO1-206ENST00000409368 ASTE1Q2TB18 679 aaPredicted RBP13.19□□□□□ -0.3
SUMO1-206ENST00000409368 PARP15Q460N3 678 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 ACCSLQ4AC99 568 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 ERMARDQ5T6L9 678 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 PIP5KL1Q5T9C9 394 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 AFMIDQ63HM1 303 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 SPECC1LQ69YQ0 1117 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 RWDD4Q6NW29 188 aaKnown RBP13.19□□□□□ -0.3
SUMO1-206ENST00000409368 LINGO4Q6UY18 593 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 DNAAF5Q86Y56 855 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 LRIG1Q96JA1 1093 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 PEBP4Q96S96 227 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 KLC2Q9H0B6 622 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 CATSPERBQ9H7T0 1116 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 EBF2Q9HAK2 575 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 PREBQ9HCU5 417 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 DNAI1Q9UI46 699 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 PCDHGB2Q9Y5G2 931 aa13.19□□□□□ -0.3
SUMO1-206ENST00000409368 SSU72P8A0A1W2PR75 194 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 A0A1W2PR77 199 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 VILLO15195 856 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 OPHN1O60890 802 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 RNF8O76064 485 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 GSRP00390 522 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 NUMBP49757 651 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 NDST2P52849 883 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 CCDC15Q0P6D6 951 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 SERINC3Q13530 473 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 HNRNPDQ14103 355 aaKnown RBP13.18□□□□□ -0.3
SUMO1-206ENST00000409368 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
SUMO1-206ENST00000409368 CARD16Q5EG05 197 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 SCYL2Q6P3W7 929 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 ALKBH5Q6P6C2 394 aaKnown RBP13.18□□□□□ -0.3
SUMO1-206ENST00000409368 DPY19L3Q6ZPD9 716 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 VSTM4Q8IW00 320 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 SPON2Q9BUD6 331 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 SNRNP25Q9BV90 132 aaKnown RBP13.18□□□□□ -0.3
SUMO1-206ENST00000409368 LRRC19Q9H756 370 aa13.18□□□□□ -0.3
SUMO1-206ENST00000409368 FSCN3Q9NQT6 498 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms