RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 GCATO75600 419 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 CTAGE8P0CG41 777 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 ACTN2P35609 894 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 COILP38432 576 aaPredicted RBP13.26□□□□□ -0.29
LIMS2-203ENST00000409254 MMP13P45452 471 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 RPS9P46781 194 aaKnown RBP13.26□□□□□ -0.29
LIMS2-203ENST00000409254 SLC6A11P48066 632 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 SOX9P48436 509 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 AP1B1Q10567 949 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 ZNF235Q14590 738 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 LBRQ14739 615 aaKnown RBP13.26□□□□□ -0.29
LIMS2-203ENST00000409254 TEX44Q53QW1 395 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 ITPRIPL1Q6GPH6 555 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 FSTL4Q6MZW2 842 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 C22orf39Q6P5X5 142 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 DARS2Q6PI48 645 aaKnown RBP13.26□□□□□ -0.29
LIMS2-203ENST00000409254 CCDC137Q6PK04 289 aaKnown RBP13.26□□□□□ -0.29
LIMS2-203ENST00000409254 MAATS1Q7Z4T9 603 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 CTAGE6Q86UF2 777 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
LIMS2-203ENST00000409254 ZNF354CQ86Y25 554 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 CTAGE4Q8IX94 777 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 KLHDC8BQ8IXV7 354 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 ALLCQ8N6M5 410 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 ST13P5Q8NFI4 369 aaPredicted RBP13.26□□□□□ -0.29
LIMS2-203ENST00000409254 SPOCK2Q92563 424 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 EDAQ92838 391 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 MYO19Q96H55 970 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 LRIG1Q96JA1 1093 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 MRGPRX3Q96LB0 322 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 SPATA13Q96N96 652 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 TMEM245Q9H330 911 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 USP29Q9HBJ7 922 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 PCDH9Q9HC56 1237 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 LTB4R2Q9NPC1 389 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 SAE1Q9UBE0 346 aaPredicted RBP13.26□□□□□ -0.29
LIMS2-203ENST00000409254 ZNF148Q9UQR1 794 aa13.26□□□□□ -0.29
LIMS2-203ENST00000409254 EDDM13A0A1B0GTR0 161 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 TARSL2A2RTX5 802 aaKnown RBP13.25□□□□□ -0.29
LIMS2-203ENST00000409254 KRBA1A5PL33 1030 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 J3KR12 359 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 K7EQS6 105 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 PDE2AO00408 941 aaPredicted RBP13.25□□□□□ -0.29
LIMS2-203ENST00000409254 SNAP91O60641 907 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 TMCC1O94876 653 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 CD160O95971 181 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 SRCP12931 536 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 VAV1P15498 845 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 AP1S1P61966 158 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 PON2Q15165 354 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 LLGL1Q15334 1064 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 PTPRNQ16849 979 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 HNRNPA1L2Q32P51 320 aaKnown RBP13.25□□□□□ -0.29
LIMS2-203ENST00000409254 GLE1Q53GS7 698 aaKnown RBP13.25□□□□□ -0.29
LIMS2-203ENST00000409254 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 ZNF513Q8N8E2 541 aaPredicted RBP13.25□□□□□ -0.29
LIMS2-203ENST00000409254 C1orf54Q8WWF1 131 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 ATG4AQ8WYN0 398 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 CLDN23Q96B33 292 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 TEKT5Q96M29 485 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 GABRG3Q99928 467 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 CINPQ9BW66 212 aaPredicted RBP13.25□□□□□ -0.29
LIMS2-203ENST00000409254 AP1M1Q9BXS5 423 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 POLR1EQ9GZS1 481 aaKnown RBP13.25□□□□□ -0.29
LIMS2-203ENST00000409254 VPS45Q9NRW7 570 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 PAK5Q9P286 719 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 SUN2Q9UH99 717 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 MUTYHQ9UIF7 546 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 ATP8A1Q9Y2Q0 1164 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
LIMS2-203ENST00000409254 CACNA1IQ9P0X4 2223 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.24□□□□□ -0.29
LIMS2-203ENST00000409254 A0A1W2PQ67 120 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 GOLGA6CA6NDK9 693 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 GOLGA6BA6NDN3 693 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 FAM187AA6NFU0 413 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 ERI2A8K979 691 aaKnown RBP13.24□□□□□ -0.29
LIMS2-203ENST00000409254 WASH3PC4AMC7 463 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 RNF103O00237 685 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 TRIM24O15164 1050 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 KCNN4O15554 427 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 ATG13O75143 517 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 NEBLO76041 1014 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 ECEL1O95672 775 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 GOLGA6DP0CG33 693 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 CR2P20023 1033 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 CA4P22748 312 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 PTPN3P26045 913 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 RBL1P28749 1068 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 NTSR1P30989 418 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 SNRPD1P62314 119 aaKnown RBP13.24□□□□□ -0.29
LIMS2-203ENST00000409254 MESP2Q0VG99 397 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 WASHC5Q12768 1159 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 ELAVL3Q14576 367 aaKnown RBP13.24□□□□□ -0.29
LIMS2-203ENST00000409254 ZNF234Q14588 700 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 SERPINA13PQ6UXR4 307 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 ADAT2Q7Z6V5 191 aaKnown RBP13.24□□□□□ -0.29
LIMS2-203ENST00000409254 TP53INP2Q8IXH6 220 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 CCDC105Q8IYK2 499 aa13.24□□□□□ -0.29
LIMS2-203ENST00000409254 SIX5Q8N196 739 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms