RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 CENPCQ03188 943 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 SKIDA1Q1XH10 827 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 ZC3H12AQ5D1E8 599 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 MANEAQ5SRI9 462 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 SYPL2Q5VXT5 272 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 RAB11FIP2Q7L804 512 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 PTRH1Q86Y79 214 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 FAM149B1Q96BN6 582 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 BTN2A3PQ96KV6 586 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 PSMG3-AS1Q96PY0 264 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 ZSWIM1Q9BR11 485 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 TCEAL2Q9H3H9 227 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 SERTAD1Q9UHV2 236 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 UTP20O75691 2785 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 D6RAR5 112 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 M0QYV0 167 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 GCATO75600 419 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 FBXO21O94952 628 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 CHRNA3P32297 505 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 RABIFP47224 123 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 RPIAP49247 311 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 IRAK1P51617 712 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 EIF2B5Q13144 721 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 SERINC3Q13530 473 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 PDE1CQ14123 709 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 IGFBP7Q16270 282 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 C4orf17Q53FE4 359 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 TTC39BQ5VTQ0 682 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 RESP18Q5W5W9 173 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 ERN2Q76MJ5 926 aaKnown RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 CEP57L1Q8IYX8 460 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 OR2A12Q8NGT7 310 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 ZNF564Q8TBZ8 553 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 PPP1R13BQ96KQ4 1090 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 FEM1AQ9BSK4 669 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 SLC17A9Q9BYT1 436 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 DYRK4Q9NR20 520 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 RABGEF1Q9UJ41 708 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 PNMA8BQ9ULN7 279 aaPredicted RBP13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 HS3ST2Q9Y278 367 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 OR51B4Q9Y5P0 310 aa13.16□□□□□ -0.3
CHRNA1-203ENST00000409219 ICE1Q9Y2F5 2266 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 PAK4O96013 591 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 IGLV3-25P01717 112 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 DEKP35659 375 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 OXCT1P55809 520 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 PITX1P78337 314 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 CCDC15Q0P6D6 951 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 C1orf61Q13536 156 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 CBWD6Q4V339 395 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 TMIEQ8NEW7 156 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 GRIN3AQ8TCU5 1115 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 GLMNQ92990 594 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 RNF34Q969K3 372 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 PAGE5Q96GU1 130 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 HSFY1Q96LI6 401 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 KLF6Q99612 283 aaPredicted RBP13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 LRRC61Q9BV99 259 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 HDAC8Q9BY41 377 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 SEPT10Q9P0V9 454 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 PISDQ9UG56 409 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 APOBEC3BQ9UH17 382 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 IPO11Q9UI26 975 aaKnown RBP13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 VPS28Q9UK41 221 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 PAXBP1Q9Y5B6 917 aa13.15□□□□□ -0.3
CHRNA1-203ENST00000409219 PRAMEF33A0A0G2JMD5 474 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 KCNU1A8MYU2 1149 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 LMO7DNF2Z398 122 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 NVLO15381 856 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 MT-CO1P00395 513 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 JMJD7P0C870 316 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 ITIH1P19827 911 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 BRD2P25440 801 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 YWHAEP62258 255 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 RPS21P63220 83 aaKnown RBP13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 ADAM9Q13443 819 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 EIF4EBP2Q13542 120 aaPredicted RBP13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 ZCWPW2Q504Y3 356 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 PRRT3Q5FWE3 981 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 RABGAP1LQ5R372 815 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 KIAA1161Q6NSJ0 714 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 ZSCAN1Q8NBB4 408 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 CHST14Q8NCH0 376 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 BTN2A2Q8WVV5 523 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 CCDC114Q96M63 670 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 STRADBQ9C0K7 418 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 CLPBQ9H078 707 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 ADNPQ9H2P0 1102 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 FAM13BQ9NYF5 915 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 KIAA1257Q9ULG3 409 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 PADI4Q9UM07 663 aa13.14□□□□□ -0.31
CHRNA1-203ENST00000409219 MAPK8IP1Q9UQF2 711 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms