RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 MCRS1Q96EZ8 462 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 CDCA5Q96FF9 252 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 KCNA7Q96RP8 456 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 HPS4Q9NQG7 708 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 PDLIM7Q9NR12 457 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 DCDC2Q9UHG0 476 aa8.46□□□□□ -1.06
SNX13-201ENST00000409076 A0A1W2PQ67 120 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 KLHL33A6NCF5 533 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 HNRNPCL1O60812 293 aaKnown RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 KATNA1O75449 491 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 SOAT2O75908 522 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PGAM1P18669 254 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 TFEBP19484 476 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 ALDH4A1P30038 563 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 SERPINB8P50452 374 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 SLC7A2P52569 658 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 STX1BP61266 288 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 CDKL1Q00532 357 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 ZBTB17Q13105 803 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 MAPK11Q15759 364 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 GRIK4Q16099 956 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 ZNF789Q5FWF6 425 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 FSTL5Q8N475 847 aaPredicted RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 SCAMP5Q8TAC9 235 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 TUBGCP3Q96CW5 907 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 NACA2Q9H009 215 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 CDH19Q9H159 772 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 COQ10BQ9H8M1 238 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 LRRC40Q9H9A6 602 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PCDH12Q9NPG4 1184 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 SEMA4BQ9NPR2 832 aaPredicted RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 GPRC5DQ9NZD1 345 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 STAP1Q9ULZ2 295 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 MKI67P46013 3256 aaKnown RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 MCM3APO60318 1980 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 FAM95CA0A1B0GW59 222 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 MYBPHLA2RUH7 354 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PPP6CO00743 305 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 SPAG6O75602 509 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 B3GAT3O94766 335 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PRSS56P0CW18 603 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 CCDC166P0CW27 439 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 BRCC3P46736 316 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PPIDQ08752 370 aaKnown RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 FASTKQ14296 549 aaKnown RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 ANKRD20A4Q4UJ75 823 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 ZNF534Q76KX8 674 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 CHSY1Q86X52 802 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 SPPL2CQ8IUH8 684 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 KLRG1Q96E93 195 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 C7orf26Q96N11 449 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 OLFM3Q96PB7 478 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PAIP1Q9H074 479 aaKnown RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 GPAMQ9HCL2 828 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 RBM22Q9NW64 420 aaKnown RBP eCLIP8.45□□□□□ -1.06
SNX13-201ENST00000409076 ABI2Q9NYB9 513 aaPredicted RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 KCTD3Q9Y597 815 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 KIAA1217Q5T5P2 1943 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 FKBP6O75344 327 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 GJB3O75712 270 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 IL18RAPO95256 599 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 AP3M2P53677 418 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PHEXP78562 749 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 TNFAIP2Q03169 654 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 BST2Q10589 180 aaKnown RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 WASHC5Q12768 1159 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 CEACAM7Q14002 265 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 VPS26BQ4G0F5 336 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 CNSTQ6PJW8 725 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 ATPAF2Q8N5M1 289 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 NLGN2Q8NFZ4 835 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 ELMO1Q92556 727 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 SMIM14Q96QK8 99 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PAAF1Q9BRP4 392 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 FAM96AQ9H5X1 160 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 TMEM134Q9H6X4 195 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 GBA2Q9HCG7 927 aaPredicted RBP8.45□□□□□ -1.06
SNX13-201ENST00000409076 UBAP1Q9NZ09 502 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 OR12D3Q9UGF7 316 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 PCDHGC3Q9UN70 934 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 ACOT9Q9Y305 439 aa8.45□□□□□ -1.06
SNX13-201ENST00000409076 ARHGAP10A1A4S6 786 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 E7ENX8 843 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 J3QRK9 145 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 NFKBIEO00221 500 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 PFKMP08237 780 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 LINC00032P0C843 101 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 MCF2P10911 925 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 ME2P23368 584 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 SCN1AP35498 2009 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 ITGA7Q13683 1181 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 KRT72Q14CN4 511 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 TEX44Q53QW1 395 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 GPR107Q5VW38 600 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 DRICH1Q6PGQ1 229 aaPredicted RBP8.44□□□□□ -1.06
SNX13-201ENST00000409076 TTC33Q6PID6 262 aaPredicted RBP8.44□□□□□ -1.06
SNX13-201ENST00000409076 KLHDC10Q6PID8 442 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 GPRIN1Q7Z2K8 1008 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 ANKRD23Q86SG2 305 aa8.44□□□□□ -1.06
SNX13-201ENST00000409076 LPGAT1Q92604 370 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms