RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ARHGAP25P42331 645 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 PI4KAP42356 2102 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 CDK17Q00537 523 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 AUHQ13825 339 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 NCAPHQ15003 741 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 EFHC1Q5JVL4 640 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 ARTNQ5T4W7 220 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 DCAF12L1Q5VU92 463 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 CXorf57Q6NSI4 855 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 CCDC70Q6NSX1 233 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 FBXL22Q6P050 247 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 SLC26A9Q7LBE3 791 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 APTXQ7Z2E3 356 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 XYLT1Q86Y38 959 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 CCAR2Q8N163 923 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 GALNT15Q8N3T1 639 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 DEFB124Q8NES8 71 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 EPS8L1Q8TE68 723 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 HNRNPLLQ8WVV9 542 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 TRIM11Q96F44 468 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 NUSAP1Q9BXS6 441 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 PARD6BQ9BYG5 372 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 STK33Q9BYT3 514 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 ASNSD1Q9NWL6 643 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 RABL2AQ9UBK7 228 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 NOCTQ9UK39 431 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 VANGL2Q9ULK5 521 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 GOLGA8SH3BPF8 625 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 PAGE1O75459 146 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 CNTN5O94779 1100 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 TOP3BO95985 862 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 ATP5BP06576 529 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 SERPINF2P08697 491 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 CCDC159P0C7I6 412 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 MSL3P1P0C860 447 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 ACADMP11310 421 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 CCR1P32246 355 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 NOVA1P51513 510 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 METAP1P53582 386 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 HDAC4P56524 1084 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 JAM2P57087 298 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 POLR2FP61218 127 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 BNC1Q01954 994 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 DUOXA1Q1HG43 343 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 HNRNPA1L2Q32P51 320 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 PLEKHG6Q3KR16 790 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 C9orf64Q5T6V5 341 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 FAM102AQ5T9C2 384 aaPredicted RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 NAA35Q5VZE5 725 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 LAYNQ6UX15 382 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 RNF34Q969K3 372 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 NACC2Q96BF6 587 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 NOX5Q96PH1 765 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 TBCBQ99426 244 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 DDX50Q9BQ39 737 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 TRIM62Q9BVG3 475 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 MIR1-1HGQ9H1L0 117 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 NLRC4Q9NPP4 1024 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 PAPOLBQ9NRJ5 636 aaKnown RBP9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 KLC4Q9NSK0 619 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 VPS18Q9P253 973 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 ERVW-1Q9UQF0 538 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 SIK3Q9Y2K2 1263 aa9.93□□□□□ -0.82
NIF3L1-202ENST00000409020 TYW5A2RUC4 315 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 ENO4A6NNW6 628 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 MEI4A8MW99 385 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 ARHGAP33O14559 1287 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 ATP1A3P13637 1013 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 ABCB4P21439 1286 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 NOS2P35228 1153 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 HOXD12P35452 270 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 MATKP42679 507 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 GABRB2P47870 512 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 SULT1E1P49888 294 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 COPB1P53618 953 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 TUBB4BP68371 445 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 NOMO3P69849 1222 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 FMO1Q01740 532 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 NSUN2Q08J23 767 aaKnown RBP eCLIP9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 IFFO1Q0D2I5 559 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 GRIK2Q13002 908 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 ALFQ53S48 1182 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 PACS1Q6VY07 963 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 B4GALNT4Q76KP1 1039 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 YTHDF3Q7Z739 585 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 PEX5LQ8IYB4 626 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 ZNF683Q8IZ20 524 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 MINDY1Q8N5J2 469 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 EMC1Q8N766 993 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 ATP6V0D2Q8N8Y2 350 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 TMEM35BQ8NCS4 154 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 C1orf216Q8TAB5 229 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 SLC30A5Q8TAD4 765 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 DNASE2BQ8WZ79 361 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 NT5C3BQ969T7 300 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 C18orf8Q96DM3 657 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 CAMK1GQ96NX5 476 aa9.92□□□□□ -0.82
NIF3L1-202ENST00000409020 RPRD1AQ96P16 312 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms