RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 BTBD3Q9Y2F9 522 aa5.29□□□□□ -1.56
HMGB1P13-201ENST00000406019 ZNF804BA4D1E1 1349 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 BTBD19C9JJ37 291 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 PPP6CO00743 305 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 PER2O15055 1255 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 LDLRAD4O15165 306 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 VILLO15195 856 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 GJB3O75712 270 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 SEC14L2O76054 403 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 MT-CO3P00414 261 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 CYP4B1P13584 511 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 MPGP29372 298 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 GJC1P36383 396 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 PSMB10P40306 273 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 CFHR3Q02985 330 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 BYSLQ13895 437 aaKnown RBP5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 SEMA3AQ14563 771 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 GPR162Q16538 588 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 ALDH1L2Q3SY69 923 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 GXYLT1Q4G148 440 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 SPECC1Q5M775 1068 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 ZNF626Q68DY1 528 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 IKBIPQ70UQ0 350 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 SZRD1Q7Z422 152 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 CNTROBQ8N137 903 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 PLD5Q8N7P1 536 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 NCSTNQ92542 709 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 ATP2A3Q93084 1043 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 PIP5K1AQ99755 562 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 SLF1Q9BQI6 1058 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 NPLQ9BXD5 320 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 TTC12Q9H892 705 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 USP29Q9HBJ7 922 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 PDGFCQ9NRA1 345 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 SNX8Q9Y5X2 465 aa5.28□□□□□ -1.56
HMGB1P13-201ENST00000406019 SPATA31A1Q5TZJ5 1347 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 SMIM35A0A1B0GVV1 85 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 LIPT2A6NK58 231 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 PTGES3LE9PB15 166 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 SYN3O14994 580 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 BCAR3O75815 825 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 TSPAN9O75954 239 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 CHRM4P08173 479 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 NR2F1P10589 423 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 SLC8A1P32418 973 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 STAT6P42226 847 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 EIF3BP55884 814 aaKnown RBP5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 SLC37A1P57057 533 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 IFI35P80217 286 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 EFNB1P98172 346 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 EPS8Q12929 822 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 CHAF1BQ13112 559 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 DAZAP2Q15038 168 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 EZH2Q15910 746 aaKnown RBP5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 AWAT1Q58HT5 328 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 PAPD7Q5XG87 772 aaKnown RBP5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 YTHDF3Q7Z739 585 aaKnown RBP5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 BRSK2Q8IWQ3 736 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 ADPRHL1Q8NDY3 354 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 MAFAQ8NHW3 353 aaPredicted RBP5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 C2CD4CQ8TF44 421 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 AKAP1Q92667 903 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 KIF1BPQ96EK5 621 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 AP1M1Q9BXS5 423 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 TXLNGYQ9BZA5 131 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 TRIM31Q9BZY9 425 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 SFXN1Q9H9B4 322 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 ERVK-5Q9HDB9 667 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 GIMAP2Q9UG22 337 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 PCDHGB4Q9UN71 923 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 PKP3Q9Y446 797 aa5.27□□□□□ -1.57
HMGB1P13-201ENST00000406019 WDR91A4D1P6 747 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 PRYO14603 147 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 TP73O15350 636 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 SPARCP09486 303 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 ALDOCP09972 364 aaKnown RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 CYP2D6P10635 497 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 CDK4P11802 303 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 PKMP14618 531 aaKnown RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 HOXB9P17482 250 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 CDH2P19022 906 aaPredicted RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 NDUFS1P28331 727 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 COPB2P35606 906 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZNF84P51523 738 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 ADPRHP54922 357 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 SHC2P98077 582 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 SLC18A3Q16572 532 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZNF667Q5HYK9 610 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 C1QTNF12Q5T7M4 302 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 MEX3CQ5U5Q3 659 aaKnown RBP5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 MORN5Q5VZ52 161 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZNF425Q6IV72 752 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 SLC18B1Q6NT16 456 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 C11orf87Q6NUJ2 197 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 NCEH1Q6PIU2 408 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 C17orf99Q6UX52 265 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 ZNF813Q6ZN06 617 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 RTL10Q7L3V2 364 aa5.26□□□□□ -1.57
HMGB1P13-201ENST00000406019 WDTC1Q8N5D0 677 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms