RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 RPS6KA6Q9UK32 745 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 SQORQ9Y6N5 450 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 TBKBP1A7MCY6 615 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 TRAFD1O14545 582 aaPredicted RBP13.52□□□□□ -0.24
SNED1-205ENST00000405547 STAU1O95793 577 aaKnown RBP13.52□□□□□ -0.24
SNED1-205ENST00000405547 ZNF286BP0CG31 522 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 CCNA2P20248 432 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 JAK1P23458 1154 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 IFNGR2P38484 337 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 RAB10P61026 200 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 ARMC3Q5W041 872 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 SYTL1Q8IYJ3 562 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 RIBC2Q9H4K1 309 aa13.52□□□□□ -0.24
SNED1-205ENST00000405547 DHRS12A0PJE2 317 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 RPS7P62081 194 aaKnown RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 NOMO3P69849 1222 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 TAF5Q15542 800 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 GRIK4Q16099 956 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 LY6KQ17RY6 165 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 WDR36Q8NI36 951 aaKnown RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 TMEM109Q9BVC6 243 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 OPTCQ9UBM4 332 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 TISP43B9A030 160 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 LRG1P02750 347 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 COX10Q12887 443 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 C12orf56Q8IXR9 622 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 TMEM86AQ8N2M4 240 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 MCOLN3Q8TDD5 553 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 GLT1D1Q96MS3 346 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 POLR1EQ9GZS1 481 aaKnown RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 TRPM5Q9NZQ8 1165 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 CSDE1O75534 798 aaKnown RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 IL6P05231 212 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 BNIP1Q12981 228 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 DPYSQ14117 519 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 CTXN3Q4LDR2 81 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 TMEM63BQ5T3F8 832 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 ALYREFQ86V81 257 aaKnown RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 C4orf32Q8N8J7 132 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 BHMTQ93088 406 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 HSD17B14Q9BPX1 270 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 MTG1Q9BT17 334 aaPredicted RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 RTN3O95197 1032 aaPredicted RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 FGRP09769 529 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 RTP1P59025 263 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 FUT2Q10981 343 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 APOBEC3HQ6NTF7 200 aaKnown RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 CARNMT1Q8N4J0 409 aa13.52□□□□□ -0.25
SNED1-205ENST00000405547 CENPIQ92674 756 aaPredicted RBP13.52□□□□□ -0.25
SNED1-205ENST00000405547 H3BN98 237 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 RNF225M0QZC1 329 aaPredicted RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 CRHR1P34998 444 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 TGM3Q08188 693 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ZCCHC8Q6NZY4 707 aaKnown RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 C11orf74Q86VG3 221 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 REPS1Q96D71 796 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 DDX4Q9NQI0 724 aaKnown RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 MAN1C1Q9NR34 630 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ATXN10Q9UBB4 475 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 UMODL1Q5DID0 1318 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 HOXA2O43364 376 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 EPB42P16452 691 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 KLHL17Q6TDP4 642 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 TLK2Q86UE8 772 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ADAM32Q8TC27 787 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 MRPS31Q92665 395 aaKnown RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 MED8Q96G25 268 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ARMC7Q9H6L4 198 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 NOL6Q9H6R4 1146 aaKnown RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 OR12D3Q9UGF7 316 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 SNX8Q9Y5X2 465 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 FAM25AB3EWG3 89 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 FAM25CB3EWG5 89 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 FAM25GB3EWG6 89 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ALDH1A2O94788 518 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 UPP2O95045 317 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 GTF2A2P52657 109 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ARSHQ5FYA8 562 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 NPNTQ6UXI9 565 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 MFSD14AQ96MC6 490 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 FHDC1Q9C0D6 1143 aaPredicted RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 ERVK-5Q9HDB9 667 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 NUDT5Q9UKK9 219 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 GSTK1Q9Y2Q3 226 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 MYL12BO14950 172 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 SPATA31C1P0DKV0 1188 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 NPR3P17342 541 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 CRADDP78560 199 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 INSCQ1MX18 579 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 KCTD21Q4G0X4 260 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ZNF280DQ6N043 979 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 DNAJC14Q6Y2X3 702 aaPredicted RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 ZNF621Q6ZSS3 439 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 ZNF572Q7Z3I7 529 aaPredicted RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 ZNF467Q7Z7K2 595 aaPredicted RBP13.51□□□□□ -0.25
SNED1-205ENST00000405547 FAM13CQ8NE31 585 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 H3BMM5 538 aa13.51□□□□□ -0.25
SNED1-205ENST00000405547 CKMP06732 381 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms