RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 NMBRP28336 390 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 COG7P83436 770 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 FOLH1Q04609 750 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 USP10Q14694 798 aaKnown RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 RFTN1Q14699 578 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 SNX17Q15036 470 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 ARL13AQ5H913 290 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 RAB41Q5JT25 222 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 UBXN11Q5T124 520 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 TMC7Q7Z402 723 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 CNTN4Q8IWV2 1026 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 MARVELD2Q8N4S9 558 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 STYXQ8WUJ0 223 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 DLG3Q92796 817 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 TSGA13Q96PP4 275 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 COLEC11Q9BWP8 271 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 ZNF385DQ9H6B1 395 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 ANLNQ9NQW6 1124 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 MRGBPQ9NV56 204 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 INPP5FQ9Y2H2 1132 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 AAR2Q9Y312 384 aaKnown RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 ZNF638Q14966 1978 aaKnown RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 TK2O00142 265 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 GRID2O43424 1007 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 CACNG3O60359 315 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 SBK3P0C264 359 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 YBX3P16989 372 aaKnown RBP eCLIP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 EPHA3P29320 983 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 ABCG1P45844 678 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 RAB27AP51159 221 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 FLOT2Q14254 428 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 ZNF423Q2M1K9 1284 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 PIGGQ5H8A4 983 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 PCID2Q5JVF3 399 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 RARS2Q5T160 578 aaKnown RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 WSCD1Q658N2 575 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 UGT2A3Q6UWM9 527 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 CCDC117Q8IWD4 279 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 EFCAB3Q8N7B9 438 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 CNTD1Q8N815 330 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 AGR3Q8TD06 166 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 DPF3Q92784 378 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 SCYL1Q96KG9 808 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 CDRT15Q96T59 188 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 APBA2Q99767 749 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 WDCPQ9H6R7 721 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 WDR55Q9H6Y2 383 aaPredicted RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 DDIT4Q9NX09 232 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 RAB26Q9ULW5 256 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 RUVBL2Q9Y230 463 aaKnown RBP10.91□□□□□ -0.66
CLIP4-204ENST00000404424 IPPQ9Y573 584 aa10.91□□□□□ -0.66
CLIP4-204ENST00000404424 SBF1O95248 1867 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 PLXNB2O15031 1838 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 ZNF236Q9UL36 1845 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 TARM1B6A8C7 271 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 I6L893 689 aaPredicted RBP10.9□□□□□ -0.66
CLIP4-204ENST00000404424 AP1G2O75843 785 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 JCHAINP01591 159 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 LHX1P48742 406 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 NAGLUP54802 743 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 DCLRE1AQ6PJP8 1040 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 DPP9Q86TI2 863 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 TMEM86AQ8N2M4 240 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 FSTL5Q8N475 847 aaPredicted RBP10.9□□□□□ -0.66
CLIP4-204ENST00000404424 ACVR1CQ8NER5 493 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 ADCY4Q8NFM4 1077 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 ZSCAN18Q8TBC5 510 aaPredicted RBP10.9□□□□□ -0.66
CLIP4-204ENST00000404424 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 LRGUKQ96M69 825 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 HAPLN3Q96S86 360 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 APOL2Q9BQE5 337 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 NUF2Q9BZD4 464 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 EFCAB1Q9HAE3 211 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 ZBTB26Q9HCK0 441 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 OR12D3Q9UGF7 316 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 ZDHHC2Q9UIJ5 367 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 ACOT9Q9Y305 439 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 PTCH2Q9Y6C5 1203 aa10.9□□□□□ -0.66
CLIP4-204ENST00000404424 NEMP1O14524 444 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 TXNDC9O14530 226 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 NPHS1O60500 1241 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 F2P00734 622 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 SLC35E2BP0CK96 405 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 TPH1P17752 444 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 CXCR3P49682 368 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 NSUN2Q08J23 767 aaKnown RBP eCLIP10.9□□□□□ -0.67
CLIP4-204ENST00000404424 ITGA7Q13683 1181 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 PM20D1Q6GTS8 502 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 LRRC8EQ6NSJ5 796 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 PKN3Q6P5Z2 889 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 PTCD2Q8WV60 388 aaKnown RBP10.9□□□□□ -0.67
CLIP4-204ENST00000404424 TMEM40Q8WWA1 233 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 DNAJB3Q8WWF6 145 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 DCUN1D1Q96GG9 259 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 MAML3Q96JK9 1138 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 PPP1R2P1Q96PQ5 205 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 SMOQ99835 787 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 CRTAC1Q9NQ79 661 aa10.9□□□□□ -0.67
CLIP4-204ENST00000404424 SLC45A1Q9Y2W3 748 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms