RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 GFM1Q96RP9 751 aaKnown RBP9.52□□□□□ -0.89
NUP43-204ENST00000403890 IMPG2Q9BZV3 1241 aa9.52□□□□□ -0.89
NUP43-204ENST00000403890 LRRC27Q9C0I9 530 aa9.52□□□□□ -0.89
NUP43-204ENST00000403890 LRRC4Q9HBW1 653 aa9.52□□□□□ -0.89
NUP43-204ENST00000403890 ZNF71Q9NQZ8 489 aaPredicted RBP9.52□□□□□ -0.89
NUP43-204ENST00000403890 GPR27Q9NS67 375 aa9.52□□□□□ -0.89
NUP43-204ENST00000403890 SPASTQ9UBP0 616 aa9.52□□□□□ -0.89
NUP43-204ENST00000403890 KLF15Q9UIH9 416 aa9.52□□□□□ -0.89
NUP43-204ENST00000403890 SRPRBQ9Y5M8 271 aaKnown RBP9.52□□□□□ -0.89
NUP43-204ENST00000403890 LRRK1Q38SD2 2015 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 VPS37CA5D8V6 355 aaPredicted RBP9.51□□□□□ -0.89
NUP43-204ENST00000403890 POM121BA6NF01 834 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 D6RAR5 112 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 LMO7DNF2Z398 122 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 IKBKBO14920 756 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 ALOX15BO15296 676 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 MTSS1O43312 755 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 HLA-DRAP01903 254 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 ITIH1P19827 911 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 CD82P27701 267 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 RABIFP47224 123 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 ADKP55263 362 aaKnown RBP9.51□□□□□ -0.89
NUP43-204ENST00000403890 TBX4P57082 545 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 DLG4P78352 724 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 SLC12A1Q13621 1099 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 DCAF6Q58WW2 860 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 MS4A13Q5J8X5 152 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 FHL5Q5TD97 284 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 ESRP1Q6NXG1 681 aaKnown RBP9.51□□□□□ -0.89
NUP43-204ENST00000403890 MSANTD2Q6P1R3 559 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 KYAT3Q6YP21 454 aaKnown RBP9.51□□□□□ -0.89
NUP43-204ENST00000403890 BRAPQ7Z569 592 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 C9orf43Q8TAL5 461 aaPredicted RBP9.51□□□□□ -0.89
NUP43-204ENST00000403890 BTN2A2Q8WVV5 523 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 USP7Q93009 1102 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 TMEM159Q96B96 161 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 PPP1R13BQ96KQ4 1090 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 NIF3L1Q9GZT8 377 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 FOXJ2Q9P0K8 574 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 FBXO2Q9UK22 296 aaPredicted RBP9.51□□□□□ -0.89
NUP43-204ENST00000403890 ZFR2Q9UPR6 939 aaKnown RBP9.51□□□□□ -0.89
NUP43-204ENST00000403890 LOXL2Q9Y4K0 774 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 SETD2Q9BYW2 2564 aaPredicted RBP9.51□□□□□ -0.89
NUP43-204ENST00000403890 UNC13CQ8NB66 2214 aa9.51□□□□□ -0.89
NUP43-204ENST00000403890 CELSR2Q9HCU4 2923 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 A0A087X0B3 334 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.5□□□□□ -0.89
NUP43-204ENST00000403890 XPO1O14980 1071 aaKnown RBP9.5□□□□□ -0.89
NUP43-204ENST00000403890 ATP9BO43861 1147 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 GCATO75600 419 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 ANXA6P08133 673 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 NOS2P35228 1153 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 PLK1P53350 603 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 OXCT1P55809 520 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 CCL7P80098 99 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 ADIGQ0VDE8 80 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 C1orf61Q13536 156 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 DLG2Q15700 870 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 PRRT3Q5FWE3 981 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 SEL1L3Q68CR1 1132 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 ARHGAP17Q68EM7 881 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 SIX6OS1Q8N1H7 587 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 SSC4DQ8WTU2 575 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 ERCC4Q92889 916 aaPredicted RBP9.5□□□□□ -0.89
NUP43-204ENST00000403890 HPS1Q92902 700 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 CATSPER2Q96P56 530 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 SLC17A9Q9BYT1 436 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 B3GNT4Q9C0J1 378 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
NUP43-204ENST00000403890 TNMDQ9H2S6 317 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 APOBEC3GQ9HC16 384 aaKnown RBP9.5□□□□□ -0.89
NUP43-204ENST00000403890 GULP1Q9UBP9 304 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 MED13Q9UHV7 2174 aa9.5□□□□□ -0.89
NUP43-204ENST00000403890 C9orf172C9J069 976 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 TULP2O00295 520 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 KPNA3O00505 521 aaPredicted RBP9.49□□□□□ -0.89
NUP43-204ENST00000403890 YY2O15391 372 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 SPINT1O43278 529 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 BNIP3LO60238 219 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 PAK4O96013 591 aaPredicted RBP9.49□□□□□ -0.89
NUP43-204ENST00000403890 RPLP0P05388 317 aaKnown RBP9.49□□□□□ -0.89
NUP43-204ENST00000403890 PDGFRAP16234 1089 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 TNFRSF8P28908 595 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 NUMBP49757 651 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 MAPK10P53779 464 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 NUCB2P80303 420 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 AMPD3Q01432 767 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 EIF2B5Q13144 721 aaKnown RBP9.49□□□□□ -0.89
NUP43-204ENST00000403890 PDE1CQ14123 709 aaPredicted RBP9.49□□□□□ -0.89
NUP43-204ENST00000403890 KNOP1Q1ED39 458 aaKnown RBP9.49□□□□□ -0.89
NUP43-204ENST00000403890 TMEM259Q4ZIN3 620 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 TMEM164Q5U3C3 297 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 Q6ZVU0 165 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 LGI2Q8N0V4 545 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 SCML4Q8N228 414 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 SDR16C5Q8N3Y7 309 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 TTC39CQ8N584 583 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 PDILTQ8N807 584 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 SLC4A11Q8NBS3 891 aa9.49□□□□□ -0.89
NUP43-204ENST00000403890 GOLGA5Q8TBA6 731 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms