RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CNTN5O94779 1100 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PAK4O96013 591 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 F13A1P00488 732 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CELA2BP08218 269 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HGFP14210 728 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 RRM1P23921 792 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NNMTP40261 264 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DUSP3P51452 185 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NDUFA8P51970 172 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HNRNPKP61978 463 aaKnown RBP eCLIP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 C1orf61Q13536 156 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 EDRF1Q3B7T1 1238 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HS1BP3Q53T59 392 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DCAF17Q5H9S7 520 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 KYAT3Q6YP21 454 aaKnown RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 BEND5Q7L4P6 421 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DSG4Q86SJ6 1040 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CCDC117Q8IWD4 279 aaPredicted RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 WDR36Q8NI36 951 aaKnown RBP12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HTR3CQ8WXA8 447 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DUSP23Q9BVJ7 150 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 BOCQ9BWV1 1114 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PCDHB4Q9Y5E5 795 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SNX10Q9Y5X0 201 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HS3ST3A1Q9Y663 406 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 WASF2Q9Y6W5 498 aa12.18□□□□□ -0.46
SPTLC1P3-201ENST00000403408 LRRK1Q38SD2 2015 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FAM237AA0A1B0GTK4 181 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NEMP2A6NFY4 417 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 A6NNZ2 444 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 AQP9O43315 295 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 APOEP02649 317 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ZSCAN22P10073 491 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ZNF18P17022 549 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CMA1P23946 247 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLC5A2P31639 672 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CYP4F2P78329 520 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 AUHQ13825 339 aaKnown RBP12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CLCA4Q14CN2 919 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ALFQ53S48 1182 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ARSIQ5FYB1 569 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 OTUD1Q5VV17 481 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TCERG1LQ5VWI1 586 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 LINGO4Q6UY18 593 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ERN2Q76MJ5 926 aaKnown RBP12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ARHGEF19Q8IW93 802 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ZNF683Q8IZ20 524 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TMIEQ8NEW7 156 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 LMX1AQ8TE12 382 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 KREMEN1Q96MU8 473 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HDAC8Q9BY41 377 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLC17A9Q9BYT1 436 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CLPBQ9H078 707 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TNKS2Q9H2K2 1166 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ACP6Q9NPH0 428 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ANKMY1Q9P2S6 941 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 VPS51Q9UID3 782 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 GGT7Q9UJ14 662 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SALL4Q9UJQ4 1053 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SLC25A13Q9UJS0 675 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 VANGL2Q9ULK5 521 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HS3ST2Q9Y278 367 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HEMK1Q9Y5R4 338 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 HS3ST4Q9Y661 456 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CSNK1G3Q9Y6M4 447 aa12.17□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DOCK4Q8N1I0 1966 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CCDC187A0A096LP49 1063 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 E5RJQ4 531 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 K7ELQ4 463 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CETN3O15182 167 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PCDH8O95206 1070 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 MYL1P05976 194 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ITGA2BP08514 1039 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 EPB41P11171 864 aaKnown RBP12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 JUNDP17535 347 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 NR0B2Q15466 257 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TBR1Q16650 682 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 C5orf22Q49AR2 442 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ATG14Q6ZNE5 492 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 DPY19L3Q6ZPD9 716 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 RRAGAQ7L523 313 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 VASH2Q86V25 355 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PARGQ86W56 976 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 GRIN3AQ8TCU5 1115 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 GRAMD1AQ96CP6 724 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 SGF29Q96ES7 293 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CCDC97Q96F63 343 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 PPP1R13BQ96KQ4 1090 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 RPRD1AQ96P16 312 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CCDC3Q9BQI4 270 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ST7Q9NRC1 585 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 VPS28Q9UK41 221 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 TBC1D30Q9Y2I9 924 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 FADS3Q9Y5Q0 445 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
SPTLC1P3-201ENST00000403408 CSMD1Q96PZ7 3565 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms