RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AGAP3Q96P47 875 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 DRC3Q9H069 523 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 RNF208Q9H0X6 261 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 ZNF385DQ9H6B1 395 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 CASS4Q9NQ75 786 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 SCN10AQ9Y5Y9 1956 aa20.16■□□□□ 0.82
CCDC47-202ENST00000403162 LTFP02788 710 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 RPL5P46777 297 aaKnown RBP20.15■□□□□ 0.82
CCDC47-202ENST00000403162 CSRP3P50461 194 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 THOP1P52888 689 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 PRKAA2P54646 552 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 OLIG2Q13516 323 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 DLG2Q15700 870 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 CNGA3Q16281 694 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 SEL1L3Q68CR1 1132 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 TICAM1Q8IUC6 712 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 NT5C3BQ969T7 300 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 PGLYRP2Q96PD5 576 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 DEFB118Q96PH6 123 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 CAB39LQ9H9S4 337 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 PLK2Q9NYY3 685 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 KLHL8Q9P2G9 620 aaPredicted RBP20.15■□□□□ 0.82
CCDC47-202ENST00000403162 RIMS3Q9UJD0 308 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 DCLK1O15075 740 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 CABYRO75952 493 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 MPSTP25325 297 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 PMLP29590 882 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 PPARGP37231 505 aaPredicted RBP20.15■□□□□ 0.82
CCDC47-202ENST00000403162 HADHAP40939 763 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 MPP3Q13368 585 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 CYLC2Q14093 348 aaPredicted RBP20.15■□□□□ 0.82
CCDC47-202ENST00000403162 MAP7Q14244 749 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 FLOT2Q14254 428 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 HERC3Q15034 1050 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 LSM12Q3MHD2 195 aaKnown RBP20.15■□□□□ 0.82
CCDC47-202ENST00000403162 ZYG11AQ6WRX3 759 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 KBTBD7Q8WVZ9 684 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 LRGUKQ96M69 825 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 TSEN34Q9BSV6 310 aaKnown RBP20.15■□□□□ 0.82
CCDC47-202ENST00000403162 ZCWPW1Q9H0M4 648 aa20.15■□□□□ 0.82
CCDC47-202ENST00000403162 PAK6Q9NQU5 681 aaPredicted RBP20.15■□□□□ 0.82
CCDC47-202ENST00000403162 GOLGA8QA0A0J9YX86 632 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 SMIM35A0A1B0GVV1 85 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 GOLGA8OA6NCC3 632 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 MOXD2PA6NHM9 499 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 GOLGA8NF8WBI6 632 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 CHRNGP07510 517 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 PTPN3P26045 913 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 HOXC8P31273 242 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 RPL14P50914 215 aaKnown RBP20.14■□□□□ 0.81
CCDC47-202ENST00000403162 HSP90AA5PQ58FG0 334 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 LIPMQ5VYY2 423 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 C9orf57Q5W0N0 161 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 FBXO46Q6PJ61 603 aaPredicted RBP20.14■□□□□ 0.81
CCDC47-202ENST00000403162 PGAM4Q8N0Y7 254 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 ADCY4Q8NFM4 1077 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 AGR3Q8TD06 166 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 CDRT15Q96T59 188 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 ACE2Q9BYF1 805 aaPredicted RBP20.14■□□□□ 0.81
CCDC47-202ENST00000403162 IL22Q9GZX6 179 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 WDR55Q9H6Y2 383 aaPredicted RBP20.14■□□□□ 0.81
CCDC47-202ENST00000403162 TMPRSS4Q9NRS4 437 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 SNTG2Q9NY99 539 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 PTTG2Q9NZH5 202 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 ANKRD6Q9Y2G4 727 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 RAD54BQ9Y620 910 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 ERI2A8K979 691 aaKnown RBP20.14■□□□□ 0.81
CCDC47-202ENST00000403162 XPO1O14980 1071 aaKnown RBP20.14■□□□□ 0.81
CCDC47-202ENST00000403162 CREB3O43889 395 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 OR6B1O95007 311 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 PGM3O95394 542 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 PDGFRBP09619 1106 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 CD1EP15812 388 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 TMEM62Q0P6H9 643 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 PPM1LQ5SGD2 360 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 KCTD11Q693B1 232 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 GDF6Q6KF10 455 aaPredicted RBP20.14■□□□□ 0.81
CCDC47-202ENST00000403162 DNAJB3Q8WWF6 145 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 DLG3Q92796 817 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 C18orf25Q96B23 403 aaPredicted RBP20.14■□□□□ 0.81
CCDC47-202ENST00000403162 GLT1D1Q96MS3 346 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 NPY6RQ99463 290 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 UBAP1Q9NZ09 502 aa20.14■□□□□ 0.81
CCDC47-202ENST00000403162 MAGEB16A2A368 324 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 KCNK1O00180 336 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 EEF2KO00418 725 aaKnown RBP20.13■□□□□ 0.81
CCDC47-202ENST00000403162 USP12O75317 370 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 CRTAMO95727 393 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 CAPNS1P04632 268 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 TFAP2AP05549 437 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 XRCC1P18887 633 aaPredicted RBP20.13■□□□□ 0.81
CCDC47-202ENST00000403162 NOS2P35228 1153 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 GNL1P36915 607 aaPredicted RBP20.13■□□□□ 0.81
CCDC47-202ENST00000403162 MRPS22P82650 360 aaKnown RBP20.13■□□□□ 0.81
CCDC47-202ENST00000403162 ITGA7Q13683 1181 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 DCAF6Q58WW2 860 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 ARMC3Q5W041 872 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 KCNMB4Q86W47 210 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 AHI1Q8N157 1196 aa20.13■□□□□ 0.81
CCDC47-202ENST00000403162 SLC2A14Q8TDB8 520 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms