RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 ACLYP53396 1101 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 NRG1Q02297 640 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 ANO4Q32M45 955 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 NAPRTQ6XQN6 538 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 NUP93Q8N1F7 819 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 C1orf74Q96LT6 269 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 DNAJC28Q9NX36 388 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 RNF186Q9NXI6 227 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 PCDHB12Q9Y5F1 795 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 PMPCBO75439 489 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 AHSGP02765 367 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 ACSBG2Q5FVE4 666 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 PIK3R6Q5UE93 754 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 ESRP1Q6NXG1 681 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 TRAF7Q6Q0C0 670 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 RAPH1Q70E73 1250 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 ARHGAP24Q8N264 748 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 WDR60Q8WVS4 1066 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 SLC39A13Q96H72 371 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 OXCT2Q9BYC2 517 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 TRPV6Q9H1D0 765 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 FAM96AQ9H5X1 160 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 ENTPD7Q9NQZ7 604 aa17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 IPO11Q9UI26 975 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 PRG3Q9Y2Y8 225 aaPredicted RBP17.21■□□□□ 0.35
DNMT3A-205ENST00000402667 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 MAGEC1O60732 1142 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 CABYRO75952 493 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 VAPBO95292 243 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 SAT1P21673 171 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 GRK4P32298 578 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 FAM189BP81408 668 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 USP10Q14694 798 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 RNF180Q86T96 592 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 FUBP3Q96I24 572 aaKnown RBP eCLIP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 RSRC1Q96IZ7 334 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 ZNF570Q96NI8 536 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 NOL6Q9H6R4 1146 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 TBC1D13Q9NVG8 400 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 CPSF2Q9P2I0 782 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 DNAJB4Q9UDY4 337 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 TLK1Q9UKI8 766 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 PLA2G4CQ9UP65 541 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 TLR6Q9Y2C9 796 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 NYNRINQ9P2P1 1898 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 MYO16Q9Y6X6 1858 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 WASH4PA8MWX3 477 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 TRIM13O60858 407 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 ARCN1P48444 511 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 RAP1GDS1P52306 607 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 PGGT1BP53609 377 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 USP46P62068 366 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 NFE2Q16621 373 aaPredicted RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 VWA5B1Q5TIE3 1220 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 MSANTD2Q6P1R3 559 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 POTEHQ6S545 545 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 KDELC2Q7Z4H8 507 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 LRRC49Q8IUZ0 686 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 CCDC117Q8IWD4 279 aaPredicted RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 CNTN4Q8IWV2 1026 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 PPHLN1Q8NEY8 458 aaKnown RBP17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 MRGPRX2Q96LB1 330 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 PPP1R2P1Q96PQ5 205 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 C1QTNF1Q9BXJ1 281 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 TCAF1Q9Y4C2 921 aa17.2■□□□□ 0.34
DNMT3A-205ENST00000402667 PHGDHO43175 533 aaKnown RBP17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 SIN3BO75182 1162 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 KLHL2O95198 593 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 HSPA4LO95757 839 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 ARNTP27540 789 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 CTBP1Q13363 440 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 RANBP10Q6VN20 620 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 DENND6AQ8IWF6 608 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 TMEM151AQ8N4L1 468 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 ZNF781Q8N8C0 355 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 FSD1LQ9BXM9 530 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 ATXN3LQ9H3M9 355 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 FBXO44Q9H4M3 255 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 SLC2A6Q9UGQ3 507 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 ANKRD6Q9Y2G4 727 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 FNDC1Q4ZHG4 1894 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 TMEM114B3SHH9 223 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 NEBLO76041 1014 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 ELF1P32519 619 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 TBX4P57082 545 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 MPP1Q00013 466 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 USP4Q13107 963 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 CNGA3Q16281 694 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 VARS2Q5ST30 1063 aaKnown RBP17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 PTCD2Q8WV60 388 aaKnown RBP17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 N4BP2L2Q92802 583 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 GATA5Q9BWX5 397 aaPredicted RBP17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 C1orf21Q9H246 121 aa17.19■□□□□ 0.34
DNMT3A-205ENST00000402667 TASP1Q9H6P5 420 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms