RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 DCP1BQ8IZD4 617 aaKnown RBP11.2□□□□□ -0.62
HPS4-202ENST00000398145 CNTD1Q8N815 330 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 SDCBP2Q9H190 292 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 RHOJQ9H4E5 214 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 VPS45Q9NRW7 570 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 PCDHGC3Q9UN70 934 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 PCDHAC2Q9Y5I4 1007 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 NFASCO94856 1347 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 HNRNPCL2B2RXH8 293 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 FAM20BO75063 409 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 HSMCR30P0CW71 290 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 SPANXN2Q5MJ10 180 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
HPS4-202ENST00000398145 GLIS2Q9BZE0 524 aaPredicted RBP11.2□□□□□ -0.62
HPS4-202ENST00000398145 EGFL7Q9UHF1 273 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 FBXO5Q9UKT4 447 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 FADS3Q9Y5Q0 445 aa11.2□□□□□ -0.62
HPS4-202ENST00000398145 H3BRB1 525 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 KATNA1O75449 491 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 ATG7O95352 703 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 ODC1P11926 461 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 ERCC2P18074 760 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 UBA1P22314 1058 aaKnown RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 IDH3AP50213 366 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 NAA20P61599 178 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 POLD3Q15054 466 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 ARL13AQ5H913 290 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 TJAP1Q5JTD0 557 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 C10orf120Q5SQS8 335 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 RNF219Q5W0B1 726 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 DNAJC14Q6Y2X3 702 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 OR56A4Q8NGH8 313 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 DCAKDQ8WVC6 231 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 OTUB1Q96FW1 271 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 TUT1Q9H6E5 874 aaKnown RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 CIDEBQ9UHD4 219 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 DSEQ9UL01 958 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 CNTNAP2Q9UHC6 1331 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 MAFO75444 373 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 LINGO3P0C6S8 592 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 GRIK3Q13003 919 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 PEX6Q13608 980 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 PFKFB4Q16877 469 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 NBPF12Q5TAG4 269 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 MIB1Q86YT6 1006 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 ADHFE1Q8IWW8 467 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 C12orf29Q8N999 325 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 MUC3BQ9H195 1237 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 TMEM245Q9H330 911 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 HPS4Q9NQG7 708 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 DDX43Q9NXZ2 648 aaKnown RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 SELENONQ9NZV5 590 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 OR12D3Q9UGF7 316 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 C3orf18Q9UK00 162 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 CRYL1Q9Y2S2 319 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 PCDHB12Q9Y5F1 795 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 KLF11O14901 512 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 PAPSS1O43252 624 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 PRIM2P49643 509 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 TRAF3Q13114 568 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 CTBP1Q13363 440 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 TOP3AQ13472 1001 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 DDR2Q16832 855 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 SLC27A1Q6PCB7 646 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 TRMT10BQ6PF06 316 aaKnown RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 RELL1Q8IUW5 271 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 GLIS1Q8NBF1 620 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 LPGAT1Q92604 370 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 DNAJC1Q96KC8 554 aaKnown RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 ACOX2Q99424 681 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 TKTL2Q9H0I9 626 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 ABI2Q9NYB9 513 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 TMEM216Q9P0N5 145 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 CRLS1Q9UJA2 301 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 LTFP02788 710 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 SERPINF2P08697 491 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 HGFP14210 728 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 MMP14P50281 582 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 CLCN5P51795 746 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 ENPEPQ07075 957 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.19□□□□□ -0.62
HPS4-202ENST00000398145 DMPKQ09013 629 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 TRIM25Q14258 630 aaKnown RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 FAM45BPQ6NSW5 357 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 STX19Q8N4C7 294 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 CD101Q93033 1021 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 NTPCRQ9BSD7 190 aaKnown RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 GATA5Q9BWX5 397 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 VTA1Q9NP79 307 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 MPP6Q9NZW5 540 aa11.19□□□□□ -0.62
HPS4-202ENST00000398145 LEF1Q9UJU2 399 aaPredicted RBP11.19□□□□□ -0.62
HPS4-202ENST00000398145 PDZK1P1A8MUH7 402 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 DDX5P17844 614 aaKnown RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 ALOX12P18054 663 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 CCDC80Q76M96 950 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 PIGZQ86VD9 579 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 PTGR2Q8N8N7 351 aaPredicted RBP11.18□□□□□ -0.62
HPS4-202ENST00000398145 BPIFB6Q8NFQ5 453 aa11.18□□□□□ -0.62
HPS4-202ENST00000398145 ACTRT2Q8TDY3 377 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms