RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 TUBGCP4Q9UGJ1 667 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 CDH9Q9ULB4 789 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 NFS1Q9Y697 457 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 BHLHE22Q8NFJ8 381 aaPredicted RBP12.6□□□□□ -0.39
SOCS6-201ENST00000397942 LMO3Q8TAP4 145 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 HDAC10Q969S8 669 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 TRAPPC9Q96Q05 1148 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 DPY30Q9C005 99 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 TCEA3O75764 348 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 TGDSO95455 350 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 GRIA3P42263 894 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 FCGRTP55899 365 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 PCBP1Q15365 356 aaKnown RBP eCLIP12.6□□□□□ -0.39
SOCS6-201ENST00000397942 PTPRNQ16849 979 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 LGI2Q8N0V4 545 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 MIER2Q8N344 545 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 DDHD1Q8NEL9 900 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 PTCH2Q9Y6C5 1203 aa12.6□□□□□ -0.39
SOCS6-201ENST00000397942 EME2A4GXA9 379 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SOWAHBA6NEL2 793 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SMIM10L2AP0DMW4 78 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SMIM10L2BP0DMW5 78 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 ZNF7P17097 686 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CRHR1P34998 444 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CD86P42081 329 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SH3PXD2AQ5TCZ1 1133 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 FAM9CQ8IZT9 166 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 MAGEC3Q8TD91 643 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 C7orf26Q96N11 449 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 GATA5Q9BWX5 397 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 FAM192AQ9GZU8 254 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 STN1Q9H668 368 aaKnown RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 DDX28Q9NUL7 540 aaKnown RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 MED1Q15648 1581 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 GVINP1Q7Z2Y8 2422 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 FGF10O15520 208 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 TM7SF2O76062 418 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 EGFRP00533 1210 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 TPSB2P20231 275 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 RAB10P61026 200 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 TPSAB1Q15661 275 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CCDC85BQ15834 202 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 METTL21CQ5VZV1 264 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 HORMAD1Q86X24 394 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SLC41A1Q8IVJ1 513 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 LPPQ93052 612 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SDCBP2Q9H190 292 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 COPG2Q9UBF2 871 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 ST3GAL5Q9UNP4 418 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 MYRFQ9Y2G1 1151 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 VWA7Q9Y334 891 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 KLRG2A4D1S0 409 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 ZNF682O95780 498 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 IL1R2P27930 398 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 VAC14Q08AM6 782 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 C9orf57Q5W0N0 161 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CLVS1Q8IUQ0 354 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SLC44A2Q8IWA5 706 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CARNMT1Q8N4J0 409 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SNRPB2P08579 225 aaKnown RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 S100A5P33763 92 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 PTPN9P43378 593 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 BRCC3P46736 316 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 KPNA1P52294 538 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 IL2P60568 153 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CCDC15Q0P6D6 951 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 INSCQ1MX18 579 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 ARL13AQ5H913 290 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 LIPMQ5VYY2 423 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 DDX53Q86TM3 631 aaKnown RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 TWNKQ96RR1 684 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SEMA4BQ9NPR2 832 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CASZ1Q86V15 1759 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 FMN2Q9NZ56 1722 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SPDYE5A6NIY4 337 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 DAB1O75553 588 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CAMK1DQ8IU85 385 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 BANPQ8N9N5 519 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 MTMR14Q8NCE2 650 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 BORCS6Q96GS4 357 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 MRPL57Q9BQC6 102 aaKnown RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 TEX12Q9BXU0 123 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 GRIP2Q9C0E4 1043 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 PDGFDQ9GZP0 370 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 SCUBE2Q9NQ36 999 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 ARHGEF3Q9NR81 526 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 MPP6Q9NZW5 540 aa12.59□□□□□ -0.39
SOCS6-201ENST00000397942 RCOR3Q9P2K3 495 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 UBA2Q9UBT2 640 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 PAIP2BQ9ULR5 123 aaKnown RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 CORO1CQ9ULV4 474 aaPredicted RBP12.59□□□□□ -0.39
SOCS6-201ENST00000397942 C15orf38-AP3S2A0A0A6YYH1 394 aa12.58□□□□□ -0.4
SOCS6-201ENST00000397942 MFSD11O43934 449 aa12.58□□□□□ -0.4
SOCS6-201ENST00000397942 SNUPNO95149 360 aaKnown RBP12.58□□□□□ -0.4
SOCS6-201ENST00000397942 SLC39A4Q6P5W5 647 aa12.58□□□□□ -0.4
SOCS6-201ENST00000397942 ARPINQ7Z6K5 226 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms