RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 TMEM121Q9BTD3 319 aa19.82■□□□□ 0.76
MAP1LC3A-203ENST00000397709 DDX47Q9H0S4 455 aaKnown RBP19.82■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SLCO3A1Q9UIG8 710 aa19.82■□□□□ 0.76
MAP1LC3A-203ENST00000397709 NDRG2Q9UN36 371 aaKnown RBP19.82■□□□□ 0.76
MAP1LC3A-203ENST00000397709 PLA2G4CQ9UP65 541 aa19.82■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ZNF148Q9UQR1 794 aa19.82■□□□□ 0.76
MAP1LC3A-203ENST00000397709 NPC1O15118 1278 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 KCNN4O15554 427 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CHRNB1P11230 501 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 MMP13P45452 471 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 RENBPP51606 427 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 GDF10P55107 478 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SEC13P55735 322 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ENPP2Q13822 863 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 DGKKQ5KSL6 1271 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 MARC1Q5VT66 337 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CCDC137Q6PK04 289 aaKnown RBP19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ALLCQ8N6M5 410 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ZNF513Q8N8E2 541 aaPredicted RBP19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FERMT1Q9BQL6 677 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CEP44Q9C0F1 390 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 TBC1D17Q9HA65 648 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SEPT10Q9P0V9 454 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SEPT3Q9UH03 358 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FCF1Q9Y324 198 aaKnown RBP19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 VCANP13611 3396 aa19.81■□□□□ 0.76
MAP1LC3A-203ENST00000397709 TRIOO75962 3097 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 RNF103O00237 685 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ZNF821O75541 412 aaPredicted RBP19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SLC34A2O95436 690 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 JCHAINP01591 159 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 STIP1P31948 543 aaKnown RBP19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 TIE1P35590 1138 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 NNMTP40261 264 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 IL12RB1P42701 662 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ST8SIA6P61647 398 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 MRPS21P82921 87 aaKnown RBP19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 C2orf54Q08AI8 447 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 LRRC32Q14392 662 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FNDC3BQ53EP0 1204 aaKnown RBP19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 TEX44Q53QW1 395 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 C22orf39Q6P5X5 142 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FAM71DQ8N9W8 422 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ATL2Q8NHH9 583 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CCDC26Q8TAB7 109 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 USP33Q8TEY7 942 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FRS2Q8WU20 508 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ISG20Q96AZ6 181 aaKnown RBP19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 PSKH2Q96QS6 385 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ACOX2Q99424 681 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 NELL2Q99435 816 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 VAT1Q99536 393 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CINPQ9BW66 212 aaPredicted RBP19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FOXQ1Q9C009 403 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 TMEM245Q9H330 911 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 RBM22Q9NW64 420 aaKnown RBP eCLIP19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 LHX3Q9UBR4 397 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 PCYOX1Q9UHG3 505 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 AMACRQ9UHK6 382 aa19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 MTF2Q9Y483 593 aaPredicted RBP19.8■□□□□ 0.76
MAP1LC3A-203ENST00000397709 C5orf60A6NFR6 353 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 TTC34A8MYJ7 566 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 RNF40O75150 1001 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 HLA-DQB2P05538 268 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 HSPA9P38646 679 aaKnown RBP19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 NRLP54845 237 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FZD5Q13467 585 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ZNF235Q14590 738 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 UBXN2BQ14CS0 331 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 DLG2Q15700 870 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 KLHL7Q8IXQ5 586 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ZNF567Q8N184 647 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 BBS5Q8N3I7 341 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SYNPOQ8N3V7 929 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 PGBD5Q8N414 524 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 PCDH20Q8N6Y1 951 aaKnown RBP19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CNTD1Q8N815 330 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CEP112Q8N8E3 955 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 MNS1Q8NEH6 495 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SLCO2A1Q92959 643 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 TEKT5Q96M29 485 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CCDC114Q96M63 670 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 RUNDC3BQ96NL0 473 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 CEP41Q9BYV8 373 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 OSBPL6Q9BZF3 934 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ZDHHC4Q9NPG8 344 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 ATP8A1Q9Y2Q0 1164 aa19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 MYO18AQ92614 2054 aaKnown RBP19.79■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FAM170BA6NMN3 283 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SGK1O00141 431 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 MUSKO15146 869 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 STK10O94804 968 aaKnown RBP19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 PRKCHP24723 683 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 LMNB2Q03252 620 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 P3H1Q32P28 736 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 HNRNPA1L2Q32P51 320 aaKnown RBP19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 C2orf27AQ580R0 203 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 FAM182AQ5T1J6 154 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 SERPINA13PQ6UXR4 307 aa19.78■□□□□ 0.76
MAP1LC3A-203ENST00000397709 TRMT11Q7Z4G4 463 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms