RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ANKRD20A3Q5VUR7 823 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 IL31Q6EBC2 164 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 ZNF354CQ86Y25 554 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 ZNF567Q8N184 647 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 ZNF419Q96HQ0 510 aaPredicted RBP17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 VAT1Q99536 393 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 IL12RB2Q99665 862 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 CEP41Q9BYV8 373 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 MUC3BQ9H195 1237 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 EBF3Q9H4W6 596 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 SP110Q9HB58 689 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 ATP13A1Q9HD20 1204 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 HPS4Q9NQG7 708 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 FAM114A2Q9NRY5 505 aa17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 KIAA1522Q9P206 1035 aaPredicted RBP17.27■□□□□ 0.35
TSPAN4-205ENST00000397406 COL4A2P08572 1712 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 TP73O15350 636 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 CACNG3O60359 315 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 OPHN1O60890 802 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 STK10O94804 968 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 ADH1CP00326 375 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 ADH5P11766 374 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 CCNB1P14635 433 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 GLDCP23378 1020 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 HLA-FP30511 346 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 CD70P32970 193 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 CARSP49589 748 aaKnown RBP17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 NUMBP49757 651 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 OXCT1P55809 520 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 GAD2Q05329 585 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 SLC12A1Q13621 1099 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 GAB4Q2WGN9 574 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 TEX44Q53QW1 395 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 C4orf22Q6V702 233 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 CCDC117Q8IWD4 279 aaPredicted RBP17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 SNF8Q96H20 258 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 SPON2Q9BUD6 331 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 SLC2A11Q9BYW1 496 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 FBXO10Q9UK96 956 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 TRHDEQ9UKU6 1024 aa17.26■□□□□ 0.35
TSPAN4-205ENST00000397406 OTOL1A6NHN0 477 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 PROB1E7EW31 1015 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 DNALI1O14645 258 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 CHADO15335 359 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ZMPSTE24O75844 475 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 SEC31AO94979 1220 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 JCHAINP01591 159 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 TUBBP07437 444 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ECHS1P30084 290 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ACTN2P35609 894 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 NBL1P41271 181 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 PLK1P53350 603 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 TNK2Q07912 1038 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 FZD5Q13467 585 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 CUL1Q13616 776 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 HNRNPDQ14103 355 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ANGPT1Q15389 498 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 MLF2Q15773 248 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ASCL5Q7RTU5 278 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 YAF2Q8IY57 180 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 MAML2Q8IZL2 1156 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 APCDD1Q8J025 514 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ZNF687Q8N1G0 1237 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 TEX26Q8N6G2 289 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 CNTD1Q8N815 330 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ZNF557Q8N988 423 aaPredicted RBP17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 DCAF4L2Q8NA75 395 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 PJA1Q8NG27 643 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 USP33Q8TEY7 942 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 LRRC45Q96CN5 670 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 TEKT5Q96M29 485 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ZNF599Q96NL3 588 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ECT2Q9H8V3 914 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 ABCB8Q9NUT2 735 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 WHRNQ9P202 907 aa17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 INTS6Q9UL03 887 aaKnown RBP17.25■□□□□ 0.35
TSPAN4-205ENST00000397406 STK25O00506 426 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 ZBTB24O43167 697 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 SNAP91O60641 907 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 METTL18O95568 372 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 MYBL2P10244 700 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 ITIH2P19823 946 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 CD68P34810 354 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 ARF5P84085 180 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 SLC10A7Q0GE19 358 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 PLEKHG6Q3KR16 790 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 IZUMO3Q5VZ72 239 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 ZDHHC24Q6UX98 284 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 CCNI2Q6ZMN8 369 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 ARHGEF18Q6ZSZ5 1173 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 PID1Q7Z2X4 250 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 KIAA0907Q7Z7F0 614 aaPredicted RBP17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 ETFBKMTQ8IXQ9 262 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 EIF1ADQ8N9N8 165 aaKnown RBP17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 IFT81Q8WYA0 676 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 ART4Q93070 314 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 NEUROG2Q9H2A3 272 aa17.24■□□□□ 0.35
TSPAN4-205ENST00000397406 HEBP1Q9NRV9 189 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms