RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 GNLYP22749 145 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 ME1P48163 572 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 MLLT10P55197 1068 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 CNTN1Q12860 1018 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 CUL2Q13617 745 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 DEFB133Q30KQ1 61 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 KRTAP21-3Q3LHN1 58 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 ZCWPW2Q504Y3 356 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 PMF1Q6P1K2 205 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 MAMDC2Q7Z304 686 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-203ENST00000397378 B3GNT8Q7Z7M8 397 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 LGI2Q8N0V4 545 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 GUF1Q8N442 669 aaKnown RBP9.67□□□□□ -0.86
NEDD9-203ENST00000397378 UBR7Q8N806 425 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 ZNF548Q8NEK5 533 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-203ENST00000397378 OR13H1Q8NG92 308 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 FAM174AQ8TBP5 190 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 DQX1Q8TE96 717 aaKnown RBP9.67□□□□□ -0.86
NEDD9-203ENST00000397378 JPH3Q8WXH2 748 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-203ENST00000397378 KLK6Q92876 244 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 ERCC4Q92889 916 aaPredicted RBP9.67□□□□□ -0.86
NEDD9-203ENST00000397378 HSFY1Q96LI6 401 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 CCDC3Q9BQI4 270 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 SLC12A9Q9BXP2 914 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 FOXP3Q9BZS1 431 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 FZD3Q9NPG1 666 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 PPM1HQ9ULR3 514 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 CSMD1Q96PZ7 3565 aa9.67□□□□□ -0.86
NEDD9-203ENST00000397378 DOCK4Q8N1I0 1966 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 CELSR2Q9HCU4 2923 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 H3BM21 787 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 MCF2LO15068 1137 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 ATP9BO43861 1147 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 PAEPP09466 180 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 HNRNPA2B1P22626 353 aaKnown RBP9.66□□□□□ -0.86
NEDD9-203ENST00000397378 GRNP28799 593 aaKnown RBP9.66□□□□□ -0.86
NEDD9-203ENST00000397378 RGS7P49802 495 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 TAS2R38P59533 333 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 STILQ15468 1287 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 CNGA2Q16280 664 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 ZNF284Q2VY69 593 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 EDRF1Q3B7T1 1238 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 ATL3Q6DD88 541 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 CAPRIN2Q6IMN6 1127 aaKnown RBP9.66□□□□□ -0.86
NEDD9-203ENST00000397378 BEND5Q7L4P6 421 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 ABI3BPQ7Z7G0 1075 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 DCP2Q8IU60 420 aaKnown RBP9.66□□□□□ -0.86
NEDD9-203ENST00000397378 SLC22A18ASQ8N1D0 253 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 CLEC4CQ8WTT0 213 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 TFAP2BQ92481 460 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 NAT6Q93015 286 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 CCDC47Q96A33 483 aaKnown RBP9.66□□□□□ -0.86
NEDD9-203ENST00000397378 MOCOSQ96EN8 888 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 PPP1R13BQ96KQ4 1090 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 BTN2A3PQ96KV6 586 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 PPP1R9BQ96SB3 815 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 IL12RB2Q99665 862 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 CUEDC1Q9NWM3 386 aaPredicted RBP9.66□□□□□ -0.86
NEDD9-203ENST00000397378 XPO7Q9UIA9 1087 aaKnown RBP9.66□□□□□ -0.86
NEDD9-203ENST00000397378 SALL4Q9UJQ4 1053 aa9.66□□□□□ -0.86
NEDD9-203ENST00000397378 MED13Q9UHV7 2174 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 A0A1W2PQU0 124 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 TCAF2A6NFQ2 919 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 TMX2-CTNND1H3BSU7 103 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 PIK3R2O00459 728 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 AQP9O43315 295 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 SEMA7AO75326 666 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 MOCS2O96007 188 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 APOEP02649 317 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 EPB41P11171 864 aaKnown RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 PDGFRAP16234 1089 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 TACR2P21452 398 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 TBXAS1P24557 533 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 AKT2P31751 481 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 RPL34P49207 117 aaKnown RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 RPIAP49247 311 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 MAPK10P53779 464 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CLDN2P57739 230 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 NUCB2P80303 420 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CCDC15Q0P6D6 951 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 KLRB1Q12918 225 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CBWD6Q4V339 395 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 LACTB2Q53H82 288 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CBWD3Q5JTY5 395 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CBWD5Q5RIA9 395 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 PIP5KL1Q5T9C9 394 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 TTC39BQ5VTQ0 682 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 RAP1GAP2Q684P5 730 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 OR6B2Q6IFH4 312 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CXorf57Q6NSI4 855 aaKnown RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 PTAR1Q7Z6K3 402 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 TAC4Q86UU9 113 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 ZC3H18Q86VM9 953 aaKnown RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 HEATR4Q86WZ0 1026 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 HORMAD1Q86X24 394 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CHSY1Q86X52 802 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 CCAR2Q8N163 923 aaKnown RBP9.65□□□□□ -0.86
NEDD9-203ENST00000397378 EFCAB3Q8N7B9 438 aa9.65□□□□□ -0.86
NEDD9-203ENST00000397378 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms