RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 CYP4X1Q8N118 509 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 ATP11CQ8NB49 1132 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 ATP2A3Q93084 1043 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 ASIC4Q96FT7 647 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 ZFYVE19Q96K21 471 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 ZNF317Q96PQ6 595 aaPredicted RBP15.22■□□□□ 0.03
CAPN3-207ENST00000397200 DHRS4Q9BTZ2 278 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 TRMT61BQ9BVS5 477 aaKnown RBP15.22■□□□□ 0.03
CAPN3-207ENST00000397200 SPHK2Q9NRA0 654 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
CAPN3-207ENST00000397200 RSPH14Q9UHP6 348 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.22■□□□□ 0.03
CAPN3-207ENST00000397200 PRUNE2Q8WUY3 3088 aa15.22■□□□□ 0.03
CAPN3-207ENST00000397200 EXOC1LA0A1B0GW35 172 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 KCNN4O15554 427 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 TBL1XO60907 577 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 CNTN5O94779 1100 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 NFATC1O95644 943 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 RBL1P28749 1068 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 NRLP54845 237 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 CDH4P55283 916 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 CCDC38Q502W7 563 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 ALFQ53S48 1182 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 ARTNQ5T4W7 220 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 TRIM68Q6AZZ1 485 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 B4GALNT4Q76KP1 1039 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 CIR1Q86X95 450 aaPredicted RBP15.21■□□□□ 0.03
CAPN3-207ENST00000397200 ADGRG2Q8IZP9 1017 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 IRF7Q92985 503 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 BHMTQ93088 406 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 NXPE3Q969Y0 559 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 RPP25Q9BUL9 199 aaKnown RBP15.21■□□□□ 0.03
CAPN3-207ENST00000397200 RABEP2Q9H5N1 569 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 RETREG1Q9H6L5 497 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 DONSONQ9NYP3 566 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 LIMD1Q9UGP4 676 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 HEY1Q9Y5J3 304 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 MYOFQ9NZM1 2061 aa15.21■□□□□ 0.03
CAPN3-207ENST00000397200 A0A1B0GVM2 712 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 TCAF2A6NFQ2 919 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 WASH4PA8MWX3 477 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 HACD1B0YJ81 288 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 DCLK1O15075 740 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 CLDN11O75508 207 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 GCATO75600 419 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 ADH1CP00326 375 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 DRD4P21917 467 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 GDI1P31150 447 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 PHBP35232 272 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 BASP1P80723 227 aaKnown RBP15.21■□□□□ 0.02
CAPN3-207ENST00000397200 GBE1Q04446 702 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 SLC10A2Q12908 348 aaPredicted RBP15.21■□□□□ 0.02
CAPN3-207ENST00000397200 ANO4Q32M45 955 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 LY6G5CQ5SRR4 150 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 MPP7Q5T2T1 576 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 CHST9Q7L1S5 443 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 TFAP2DQ7Z6R9 452 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 TRABD2AQ86V40 505 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 TMEM25Q86YD3 366 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 PDIK1LQ8N165 341 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 RTL3Q8N8U3 475 aaKnown RBP15.21■□□□□ 0.02
CAPN3-207ENST00000397200 FAM83CQ9BQN1 747 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 EBF3Q9H4W6 596 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 ACSS3Q9H6R3 686 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 ETNK2Q9NVF9 386 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 TMEM248Q9NWD8 314 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 RABGEF1Q9UJ41 708 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 TEX264Q9Y6I9 313 aa15.21■□□□□ 0.02
CAPN3-207ENST00000397200 TMEM120BA0PK00 339 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 GOLGA8MH3BSY2 632 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 BANF1O75531 89 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 CYP17A1P05093 508 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 ARSAP15289 507 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 CREB1P16220 341 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 SERPINB6P35237 376 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 SLC18A1P54219 525 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 DHCR24Q15392 516 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 FYB2Q5VWT5 728 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 CCDC117Q8IWD4 279 aaPredicted RBP15.2■□□□□ 0.02
CAPN3-207ENST00000397200 MCUQ8NE86 351 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 PYROXD1Q8WU10 500 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 CHMP6Q96FZ7 201 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 BBS2Q9BXC9 721 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 KLC2Q9H0B6 622 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 KCNK12Q9HB15 430 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 PLK2Q9NYY3 685 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 DTLQ9NZJ0 730 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 MARK1Q9P0L2 795 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 SENP1Q9P0U3 644 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 IGSF9Q9P2J2 1179 aa15.2■□□□□ 0.02
CAPN3-207ENST00000397200 RRP15Q9Y3B9 282 aaKnown RBP15.2■□□□□ 0.02
CAPN3-207ENST00000397200 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.19■□□□□ 0.02
CAPN3-207ENST00000397200 NEDD8-MDP1E9PL57 170 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 H0Y626 953 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 SPAG6O75602 509 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 LUC7L3O95232 432 aaKnown RBP15.19■□□□□ 0.02
CAPN3-207ENST00000397200 PENKP01210 267 aaPredicted RBP15.19■□□□□ 0.02
CAPN3-207ENST00000397200 ADH5P11766 374 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 TPSB2P20231 275 aa15.19■□□□□ 0.02
CAPN3-207ENST00000397200 HOXD9P28356 352 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms