RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 TMIEQ8NEW7 156 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 RNF25Q96BH1 459 aaPredicted RBP10.8□□□□□ -0.68
NUP98-205ENST00000397007 DONSONQ9NYP3 566 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 STON1Q9Y6Q2 735 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 LRRD1A4D1F6 860 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 TUBB4AP04350 444 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 DESP17661 470 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 GM2AP17900 193 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 DRD3P35462 400 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 ARL4AP40617 200 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 CRY1Q16526 586 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 C22orf39Q6P5X5 142 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 RNF34Q969K3 372 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 ALS2CR12Q96Q35 445 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 FBXO4Q9UKT5 387 aa10.8□□□□□ -0.68
NUP98-205ENST00000397007 TTC34A8MYJ7 566 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 H0Y626 953 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 CST8O60676 142 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 ADRA1AP35348 466 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 CDH18Q13634 790 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 SLC45A4Q5BKX6 768 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 PPP6R3Q5H9R7 873 aaPredicted RBP10.79□□□□□ -0.68
NUP98-205ENST00000397007 NCEH1Q6PIU2 408 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 ZSWIM9Q86XI8 627 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 PCDH20Q8N6Y1 951 aaKnown RBP10.79□□□□□ -0.68
NUP98-205ENST00000397007 UBL4BQ8N7F7 174 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 ZBTB44Q8NCP5 570 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 ANP32BQ92688 251 aaKnown RBP10.79□□□□□ -0.68
NUP98-205ENST00000397007 DOCK9Q9BZ29 2069 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 SLCO3A1Q9UIG8 710 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 SIT1Q9Y3P8 196 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 COL5A1P20908 1838 aaPredicted RBP10.79□□□□□ -0.68
NUP98-205ENST00000397007 C5orf60A6NFR6 353 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 FAM170BA6NMN3 283 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 PRLP01236 227 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 NTSR1P30989 418 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 SERPINB6P35237 376 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 PTGIRP43119 386 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 CREB5Q02930 508 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 CCNG2Q16589 344 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 C2orf49Q9BVC5 232 aaPredicted RBP10.79□□□□□ -0.68
NUP98-205ENST00000397007 LMAN1LQ9HAT1 526 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 TRMT1Q9NXH9 659 aaKnown RBP10.79□□□□□ -0.68
NUP98-205ENST00000397007 SAE1Q9UBE0 346 aaPredicted RBP10.79□□□□□ -0.68
NUP98-205ENST00000397007 DKK3Q9UBP4 350 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP98-205ENST00000397007 MCF2LO15068 1137 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 GCATO75600 419 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 GABRG2P18507 467 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 PTPN3P26045 913 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 SKOR1P84550 965 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 SLC10A7Q0GE19 358 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 TFDP2Q14188 446 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 AGERQ15109 404 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 RPS6KA1Q15418 735 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 ZNF569Q5MCW4 686 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 WDR5BQ86VZ2 330 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 RPLP0P6Q8NHW5 317 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 SEC14L1Q92503 715 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 IMP4Q96G21 291 aaKnown RBP10.79□□□□□ -0.68
NUP98-205ENST00000397007 GPR27Q9NS67 375 aa10.79□□□□□ -0.68
NUP98-205ENST00000397007 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 ENC1O14682 589 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 GJB3O75712 270 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 TMCC1O94876 653 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 IVDP26440 423 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 RPS14P62263 151 aaKnown RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 SATB1Q01826 763 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 ZNF211Q13398 564 aaPredicted RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 KDELC1Q6UW63 502 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 PRPF39Q86UA1 669 aaKnown RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 ALLCQ8N6M5 410 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 CYB5D2Q8WUJ1 264 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 NUDCD1Q96RS6 583 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 KCNH6Q9H252 994 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 SARDHQ9UL12 918 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 MRPS17Q9Y2R5 130 aaKnown RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 ARIH1Q9Y4X5 557 aaPredicted RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 ARHGAP42A6NI28 874 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 GDF10P55107 478 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 NIPAL4Q0D2K0 466 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 KRT81Q14533 505 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 CAMKK1Q8N5S9 505 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 NETO2Q8NC67 525 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 ACTL9Q8TC94 416 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 CELF6Q96J87 481 aaKnown RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 TUBGCP5Q96RT8 1024 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 LGMNQ99538 433 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 C19orf43Q9BQ61 176 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 L2HGDHQ9H9P8 463 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 STIM2Q9P246 746 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 PCYOX1Q9UHG3 505 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 IPO11Q9UI26 975 aaKnown RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 EDDM13A0A1B0GTR0 161 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 ZNF185O15231 689 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 ZNF189O75820 626 aaPredicted RBP10.78□□□□□ -0.68
NUP98-205ENST00000397007 HLA-DQB2P05538 268 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 AVPR2P30518 371 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 TAS2R38P59533 333 aa10.78□□□□□ -0.68
NUP98-205ENST00000397007 OTUD4Q01804 1114 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms