RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PRDM8Q9NQV8 689 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 AK5Q9Y6K8 562 aa14.15□□□□□ -0.14
COL4A3-202ENST00000396578 LOC110117498-PIK3R3F6TDL0 507 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 AKAP3O75969 853 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 UNC5CO95185 931 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 ANPEPP15144 967 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 SREBF1P36956 1147 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 RPL5P46777 297 aaKnown RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 TUBP50607 506 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 FBXO47Q5MNV8 452 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 HYIQ5T013 277 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 CES3Q6UWW8 571 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 SMARCD1Q96GM5 515 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 TIMMDC1Q9NPL8 285 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 DNPEPQ9ULA0 475 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 DMTF1Q9Y222 760 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 ZNF879B4DU55 563 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 SEMA3DO95025 777 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 NAA20P61599 178 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 CAMK1Q14012 370 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 GPR107Q5VW38 600 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 SFRP1Q8N474 314 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 AGAP11Q8TF27 550 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 MARK4Q96L34 752 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 STOML2Q9UJZ1 356 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 PSME2Q9UL46 239 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 OGDHLQ9ULD0 1010 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 TBC1D30Q9Y2I9 924 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 PLA2R1Q13018 1463 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 MLYCDO95822 493 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 PLD1Q13393 1074 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 TOMM20Q15388 145 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 SETMARQ53H47 684 aaPredicted RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 TAAR1Q96RJ0 339 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 C1QTNF7Q9BXJ2 289 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 LRMDAQ9H2I8 198 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 ELL3Q9HB65 397 aaPredicted RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 RAPGEFL1Q9UHV5 662 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 ANGPT4Q9Y264 503 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 MYH9P35579 1960 aaKnown RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 GSAPA4D1B5 854 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 CHADO15335 359 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 PSIP1O75475 530 aaKnown RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 PTPAQ15257 358 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 BHLHB9Q6PI77 547 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 PCDH20Q8N6Y1 951 aaKnown RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 AHCYL2Q96HN2 611 aaKnown RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 CAB39LQ9H9S4 337 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 EPORP19235 508 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 DGKAP23743 735 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 UGT2B15P54855 530 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 ACSM2AQ08AH3 577 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 ACSM2BQ68CK6 577 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 ZC3H7AQ8IWR0 971 aaKnown RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 FAM151AQ8WW52 585 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 CKAP2Q8WWK9 683 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 HPS1Q92902 700 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 XPNPEP3Q9NQH7 507 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 GPC6Q9Y625 555 aaPredicted RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 MYH15Q9Y2K3 1946 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 NFE2Q16621 373 aaPredicted RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 RBM43Q6ZSC3 357 aaKnown RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 SCAIQ8N9R8 606 aa14.14□□□□□ -0.15
COL4A3-202ENST00000396578 DNAJC1Q96KC8 554 aaKnown RBP14.14□□□□□ -0.15
COL4A3-202ENST00000396578 ANKDD1BA6NHY2 528 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 TCEA3O75764 348 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 CST1P01037 141 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 CETPP11597 493 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 FOSL2P15408 326 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 AMPD2Q01433 879 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 ZNF268Q14587 947 aaPredicted RBP14.13□□□□□ -0.15
COL4A3-202ENST00000396578 ZNHIT3Q15649 155 aaPredicted RBP14.13□□□□□ -0.15
COL4A3-202ENST00000396578 MAPKAPK3Q16644 382 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 CYP2A13Q16696 494 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 GCNT7Q6ZNI0 430 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 PALB2Q86YC2 1186 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 PPP1R14BQ96C90 147 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 G3V2T6 193 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 CDKAL1Q5VV42 579 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 ETNPPLQ8TBG4 499 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 UBE2E3Q969T4 207 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 GLT1D1Q96MS3 346 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 TMEM51Q9NW97 253 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 LEF1Q9UJU2 399 aaPredicted RBP14.13□□□□□ -0.15
COL4A3-202ENST00000396578 ZSCAN5CA6NGD5 496 aaPredicted RBP14.13□□□□□ -0.15
COL4A3-202ENST00000396578 MAPTP10636 758 aaKnown RBP14.13□□□□□ -0.15
COL4A3-202ENST00000396578 RPL3P39023 403 aaKnown RBP14.13□□□□□ -0.15
COL4A3-202ENST00000396578 CRY1Q16526 586 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 EDEM1Q92611 657 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 GSDMCQ9BYG8 508 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 ZNF157P51786 506 aaPredicted RBP14.13□□□□□ -0.15
COL4A3-202ENST00000396578 BNIP2Q12982 314 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 DAW1Q8N136 415 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 STAG3L4Q8TBR4 150 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 SELENOMQ8WWX9 145 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 NELL1Q92832 810 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 ZNF304Q9HCX3 659 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 GNPTGQ9UJJ9 305 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 MAGI3Q5TCQ9 1506 aa14.13□□□□□ -0.15
COL4A3-202ENST00000396578 IGSF6O95976 241 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms