RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ATG14Q6ZNE5 492 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 TMPRSS6Q8IU80 811 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 PPHLN1Q8NEY8 458 aaKnown RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 IPMKQ8NFU5 416 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 RDH11Q8TC12 318 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 ATXN7L3BQ96GX2 97 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 RILPQ96NA2 401 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 FTHL17Q9BXU8 183 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 TRPV6Q9H1D0 765 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 NOL6Q9H6R4 1146 aaKnown RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 CAB39LQ9H9S4 337 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.05■□□□□ 0.32
NUP50-202ENST00000396096 RBM22Q9NW64 420 aaKnown RBP eCLIP17.05■□□□□ 0.32
NUP50-202ENST00000396096 PCDHB5Q9Y5E4 795 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 ZNF195O14628 629 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 PEX11BO96011 259 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 RHOQP17081 205 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 GNAZP19086 355 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 AOC1P19801 751 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 GMPRP36959 345 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 ARCN1P48444 511 aaKnown RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 ITGA9Q13797 1035 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 GRM3Q14832 879 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 VARS2Q5ST30 1063 aaKnown RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 RANBP10Q6VN20 620 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 ARHGAP24Q8N264 748 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 ANKRD27Q96NW4 1050 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 DONSONQ9NYP3 566 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 NKX1-2Q9UD57 310 aaPredicted RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 IPO11Q9UI26 975 aaKnown RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 NUDT5Q9UKK9 219 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 MAGED2Q9UNF1 606 aaPredicted RBP17.05■□□□□ 0.32
NUP50-202ENST00000396096 TCAF1Q9Y4C2 921 aa17.05■□□□□ 0.32
NUP50-202ENST00000396096 MAGEC1O60732 1142 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 MOCS2O96007 188 aaPredicted RBP17.04■□□□□ 0.32
NUP50-202ENST00000396096 COL6A2P12110 1019 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 RAP1GDS1P52306 607 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 TBX4P57082 545 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 IRF9Q00978 393 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 DLG2Q15700 870 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 DDR2Q16832 855 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 RFWD3Q6PCD5 774 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 MAVSQ7Z434 540 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 ACVR1CQ8NER5 493 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 SREK1Q8WXA9 508 aaKnown RBP17.04■□□□□ 0.32
NUP50-202ENST00000396096 MCUR1Q96AQ8 359 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 MRGPRX2Q96LB1 330 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 NUDCD1Q96RS6 583 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 C1QTNF1Q9BXJ1 281 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.32
NUP50-202ENST00000396096 NMRAL1Q9HBL8 299 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 ARNT2Q9HBZ2 717 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 TREX1Q9NSU2 369 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 TMEM248Q9NWD8 314 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 TMEM161AQ9NX61 479 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 CLIC5Q9NZA1 410 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 MPP6Q9NZW5 540 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 DNAJB4Q9UDY4 337 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 SRRDQ9UH36 339 aa17.04■□□□□ 0.32
NUP50-202ENST00000396096 IGLV3-10A0A075B6K4 115 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 OR6C75A6NL08 312 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 SPECC1L-ADORA2AF8WAN1 911 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 KLHL2O95198 593 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 ENO1P06733 434 aaKnown RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 TPBGLP0DKB5 382 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 ABCG1P45844 678 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 GPR15P49685 360 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 PRKAA2P54646 552 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 ALDH18A1P54886 795 aaKnown RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 USP46P62068 366 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 TNK2Q07912 1038 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 HNRNPDQ14103 355 aaKnown RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 KDELC1Q6UW63 502 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 FAM193BQ96PV7 902 aaPredicted RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 PRKD2Q9BZL6 878 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 SLC25A51Q9H1U9 297 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 C1orf21Q9H246 121 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 DCLRE1BQ9H816 532 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 PNPOQ9NVS9 261 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 GMIPQ9P107 970 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 SLC39A10Q9ULF5 831 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 APOBEC2Q9Y235 224 aaKnown RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 PRG3Q9Y2Y8 225 aaPredicted RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 CDY1Q9Y6F8 540 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 B2RBV5 119 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 TRIM13O60858 407 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 TADA2AO75478 443 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 F7P08709 466 aaPredicted RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 ARNTP27540 789 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 GABRB3P28472 473 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 IDH3AP50213 366 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 POU6F1Q14863 301 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 SDHAF4Q5VUM1 108 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 KIAA0930Q6ICG6 404 aaPredicted RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 TNS4Q8IZW8 715 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 TTC8Q8TAM2 541 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 ZYG11BQ9C0D3 744 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 ATP13A1Q9HD20 1204 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms