RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 RENBPP51606 427 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 KCNQ1P51787 676 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 ITKQ08881 620 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 TEDDM1Q5T9Z0 273 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 KDELC2Q7Z4H8 507 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 FITM2Q8N6M3 262 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 ATP2A3Q93084 1043 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 KLHL5Q96PQ7 755 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 RBBP8Q99708 897 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 IARS2Q9NSE4 1012 aaKnown RBP12.34□□□□□ -0.43
ITGB1-202ENST00000396033 DNMT3LQ9UJW3 386 aa12.34□□□□□ -0.43
ITGB1-202ENST00000396033 CCDC195A0A1B0GUA6 201 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 PEX11BO96011 259 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 SPRP35270 261 aaPredicted RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 HNRNPDQ14103 355 aaKnown RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 PDE1CQ14123 709 aaPredicted RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 PCID2Q5JVF3 399 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 ACBD5Q5T8D3 534 aaPredicted RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 NADSYN1Q6IA69 706 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 TMCO2Q7Z6W1 182 aaPredicted RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 TRIM42Q8IWZ5 723 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 RNF168Q8IYW5 571 aaPredicted RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 RNF217Q8TC41 542 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 NSMCE1Q8WV22 266 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 C10orf82Q8WW14 230 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 PSMG2Q969U7 264 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 KIFC1Q9BW19 673 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 ENTPD7Q9NQZ7 604 aa12.33□□□□□ -0.43
ITGB1-202ENST00000396033 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 HBS1LQ9Y450 684 aaKnown RBP12.33□□□□□ -0.43
ITGB1-202ENST00000396033 DRGXA6NNA5 263 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 GLRA3O75311 464 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 TACR2P21452 398 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 ATP5C1P36542 298 aaKnown RBP12.33□□□□□ -0.44
ITGB1-202ENST00000396033 IRX4P78413 519 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 POLD3Q15054 466 aaPredicted RBP12.33□□□□□ -0.44
ITGB1-202ENST00000396033 E2F5Q15329 346 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 PCSK7Q16549 785 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 MARC1Q5VT66 337 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 PDZD8Q8NEN9 1154 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 AZIN2Q96A70 460 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF778Q96MU6 729 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 CLSTN3Q9BQT9 956 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 SLC25A51Q9H1U9 297 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 F5H5T6 163 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 GOLGA8TH3BQL2 631 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 SEC24AO95486 1093 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 SOD2P04179 222 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 TYK2P29597 1187 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 ALDH3A1P30838 453 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 OR1E1P30953 314 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 ADRA1AP35348 466 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 LIMK2P53671 638 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 MAXP61244 160 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 MTA1Q13330 715 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 MPP3Q13368 585 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 SETDB1Q15047 1291 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 DENND5AQ6IQ26 1287 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 NUDCD3Q8IVD9 361 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 DCLK2Q8N568 766 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 MYEOVQ96EZ4 313 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 TMEM169Q96HH4 297 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 MRGPRX2Q96LB1 330 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 CEP295NLQ96MC4 621 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 CRISPLD2Q9H0B8 497 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 ATXN3LQ9H3M9 355 aa12.33□□□□□ -0.44
ITGB1-202ENST00000396033 TMPRSS15P98073 1019 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 SLC10A7Q0GE19 358 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 N4BP2L1Q5TBK1 243 aaPredicted RBP12.32□□□□□ -0.44
ITGB1-202ENST00000396033 PDPK2PQ6A1A2 396 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 PKN3Q6P5Z2 889 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 KYAT3Q6YP21 454 aaKnown RBP12.32□□□□□ -0.44
ITGB1-202ENST00000396033 LGI2Q8N0V4 545 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF558Q96NG5 402 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 TRIM55Q9BYV6 548 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 CYP4F11Q9HBI6 524 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 SNX15Q9NRS6 342 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 ZNF212Q9UDV6 495 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 DCTN4Q9UJW0 460 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 KLF11O14901 512 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 ABCG1P45844 678 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 SERPINB8P50452 374 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 WNT3AP56704 352 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 CHI3L2Q15782 390 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 PARP15Q460N3 678 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 ATG16L1Q676U5 607 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 C16orf46Q6P387 395 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 CMC1Q7Z7K0 106 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 FATE1Q969F0 183 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 E2F7Q96AV8 911 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 VWCEQ96DN2 955 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.32□□□□□ -0.44
ITGB1-202ENST00000396033 COL4A6Q14031 1691 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 DNAJC8O75937 253 aaPredicted RBP12.32□□□□□ -0.44
ITGB1-202ENST00000396033 GJB5O95377 273 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 CLTBP09497 229 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 MAPKAPK2P49137 400 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 CCDC15Q0P6D6 951 aa12.32□□□□□ -0.44
ITGB1-202ENST00000396033 SEPT6Q14141 434 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms