RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 POU5F1Q01860 360 aaKnown RBP5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 TAP1Q03518 808 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 IRF3Q14653 427 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 ME3Q16798 604 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 CEP85Q6P2H3 762 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 TMCO3Q6UWJ1 677 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 SERPINA13PQ6UXR4 307 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 PRRT2Q7Z6L0 340 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 KRT77Q7Z794 578 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 TADA2BQ86TJ2 420 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 FAM160B2Q86V87 743 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 FRMD1Q8N878 549 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 SH3RF3Q8TEJ3 882 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 KAT2AQ92830 837 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 RITA1Q96K30 269 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 FCRL5Q96RD9 977 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 SLF1Q9BQI6 1058 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 STRA6Q9BX79 667 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 CYP4F11Q9HBI6 524 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 ERVK-5Q9HDB9 667 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 ATP8A2Q9NTI2 1148 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 ARL8BQ9NVJ2 186 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 RPS6KA6Q9UK32 745 aa5.34□□□□□ -1.55
HMGB1P10-201ENST00000395823 CBY3A6NI87 242 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 C1QTNF3-AMACRE9PGA6 284 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 BCAT2O15382 392 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 ERAL1O75616 437 aaKnown RBP5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 BEST1O76090 585 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 HEXAP06865 529 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 NHLRC4P0CG21 123 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 ST6GAL1P15907 406 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 PPARGP37231 505 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 SNX16P57768 344 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 EPS8Q12929 822 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 ALG11Q2TAA5 492 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 KIAA1755Q5JYT7 1200 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 CC2D1BQ5T0F9 858 aaKnown RBP5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 MFSD4BQ5TF39 518 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 VWA5B1Q5TIE3 1220 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 HECTD2Q5U5R9 776 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 ERICH6BQ5W0A0 696 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 TXNDC8Q6A555 127 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 RBM44Q6ZP01 1051 aaKnown RBP5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 PRSS45Q7RTY3 260 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 TRIM74Q86UV6 250 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 TRIM73Q86UV7 250 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 CCDC105Q8IYK2 499 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM9BQ8IZU0 186 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 C11orf65Q8NCR3 313 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 DNAAF1Q8NEP3 725 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 CALML4Q96GE6 196 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 ZNF764Q96H86 408 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 FRG2BQ96QU4 278 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 TXLNGYQ9BZA5 131 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 IKZF4Q9H2S9 585 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 EHD2Q9NZN4 543 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 NCKIPSDQ9NZQ3 722 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 SH3BP4Q9P0V3 963 aa5.33□□□□□ -1.56
HMGB1P10-201ENST00000395823 PASKQ96RG2 1323 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 A8MZ25 164 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 TAF4O00268 1085 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 TSPAN9O75954 239 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 JTBO76095 146 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 HLA-DQA2P01906 255 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 KRT4P19013 534 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 HOXA7P31268 230 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 BLKP51451 505 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 PGM5Q15124 567 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 PFKFB3Q16875 520 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 PLK5Q496M5 336 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 C5orf22Q49AR2 442 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM133BQ5BKY9 247 aaKnown RBP5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 C10orf76Q5T2E6 689 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 FAM171A1Q5VUB5 890 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 KLHL35Q6PF15 583 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 ZNF627Q7L945 461 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 AMIGO2Q86SJ2 522 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 C16orf71Q8IYS4 520 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 GDPD5Q8WTR4 605 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 NOC3LQ8WTT2 800 aaKnown RBP5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 NELL1Q92832 810 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 ARHGEF2Q92974 986 aaKnown RBP5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 CMTM3Q96MX0 182 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 GRHL1Q9NZI5 618 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 ABI3Q9P2A4 366 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 DHDHQ9UQ10 334 aa5.32□□□□□ -1.56
HMGB1P10-201ENST00000395823 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 A0A1W2PQ09 198 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 TARM1B6A8C7 271 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 CCER2I3L3R5 266 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 NR2F1P10589 423 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 ZNF8P17098 575 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 CDH2P19022 906 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 MAKP20794 623 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 SKIV2L2P42285 1042 aaKnown RBP5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 ARSFP54793 590 aa5.31□□□□□ -1.56
HMGB1P10-201ENST00000395823 YPEL5P62699 121 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms