RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 GATAD2AQ86YP4 633 aa16.53■□□□□ 0.24
CXCL12-206ENST00000395795 TBC1D3Q8IZP1 549 aaPredicted RBP16.53■□□□□ 0.24
CXCL12-206ENST00000395795 ATP11CQ8NB49 1132 aa16.53■□□□□ 0.24
CXCL12-206ENST00000395795 MSANTD4Q8NCY6 345 aa16.53■□□□□ 0.24
CXCL12-206ENST00000395795 C3orf20Q8ND61 904 aa16.53■□□□□ 0.24
CXCL12-206ENST00000395795 ADAM22Q9P0K1 906 aa16.53■□□□□ 0.24
CXCL12-206ENST00000395795 OR12D3Q9UGF7 316 aa16.53■□□□□ 0.24
CXCL12-206ENST00000395795 TPX2Q9ULW0 747 aaKnown RBP16.53■□□□□ 0.24
CXCL12-206ENST00000395795 ZFR2Q9UPR6 939 aaKnown RBP16.53■□□□□ 0.24
CXCL12-206ENST00000395795 COL5A1P20908 1838 aaPredicted RBP16.52■□□□□ 0.24
CXCL12-206ENST00000395795 ZZEF1O43149 2961 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 SIGLEC16A6NMB1 481 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 TLR4O00206 839 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 BNIP3LO60238 219 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 MAT2AP31153 395 aaKnown RBP16.52■□□□□ 0.24
CXCL12-206ENST00000395795 SDC4P31431 198 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 RPL7AP62424 266 aaKnown RBP16.52■□□□□ 0.24
CXCL12-206ENST00000395795 OGDHQ02218 1023 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 SCAPQ12770 1279 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 SFMBT2Q5VUG0 894 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.24
CXCL12-206ENST00000395795 DRC7Q8IY82 874 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 PYROXD2Q8N2H3 581 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 AOPEPQ8N6M6 819 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 MFSD2AQ8NA29 543 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 NEK11Q8NG66 645 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 FAM172AQ8WUF8 416 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 NTAN1Q96AB6 310 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 CDC6Q99741 560 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 AGPAT1Q99943 283 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 AASDHPPTQ9NRN7 309 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 TMEM248Q9NWD8 314 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 TAS2R14Q9NYV8 317 aa16.52■□□□□ 0.24
CXCL12-206ENST00000395795 TMEM8BA6NDV4 472 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 C1QTNF3-AMACRE9PGA6 284 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 CBX4O00257 560 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 SPINT1O43278 529 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 DFNA5O60443 496 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 KRT3P12035 628 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 RHOQP17081 205 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 EPHA8P29322 1005 aaPredicted RBP16.51■□□□□ 0.23
CXCL12-206ENST00000395795 GRK6P43250 576 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 RXRGP48443 463 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 C21orf59P57076 290 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 BNIP3Q12983 259 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 FGL2Q14314 439 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 ZNF284Q2VY69 593 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 ARSIQ5FYB1 569 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 TMPRSS7Q7RTY8 843 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 ADAT2Q7Z6V5 191 aaKnown RBP16.51■□□□□ 0.23
CXCL12-206ENST00000395795 ARHGEF2Q92974 986 aaKnown RBP16.51■□□□□ 0.23
CXCL12-206ENST00000395795 FUCA2Q9BTY2 467 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 SPON2Q9BUD6 331 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 HDAC8Q9BY41 377 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 CEP44Q9C0F1 390 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 ERVMER34-1Q9H9K5 563 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 PREBQ9HCU5 417 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 ATP13A1Q9HD20 1204 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
CXCL12-206ENST00000395795 DMTF1Q9Y222 760 aa16.51■□□□□ 0.23
CXCL12-206ENST00000395795 APOBEC2Q9Y235 224 aaKnown RBP16.51■□□□□ 0.23
CXCL12-206ENST00000395795 FCF1Q9Y324 198 aaKnown RBP16.51■□□□□ 0.23
CXCL12-206ENST00000395795 CXorf51AA0A1B0GTR3 108 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 SRRM3A6NNA2 597 aaPredicted RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 KPNA3O00505 521 aaPredicted RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 CCP110O43303 1012 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 TNFSF14O43557 240 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 RNGTTO60942 597 aaKnown RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 LEFTY1O75610 366 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 MBD3O95983 291 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 PLEKP08567 350 aaPredicted RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 GPD1P21695 349 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 NSFP46459 744 aaKnown RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 C1QBPQ07021 282 aaKnown RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 SLC20A2Q08357 652 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 CAMK2BQ13554 666 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 SUZ12Q15022 739 aaKnown RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 ANO6Q4KMQ2 910 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 TMEM259Q4ZIN3 620 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 PRPF39Q86UA1 669 aaKnown RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 IQCHQ86VS3 1027 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 MCOLN2Q8IZK6 566 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 ARFGAP1Q8N6T3 406 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 GRIN3AQ8TCU5 1115 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 ZCCHC14Q8WYQ9 949 aaKnown RBP16.5■□□□□ 0.23
CXCL12-206ENST00000395795 KLC2Q9H0B6 622 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 IL36AQ9UHA7 158 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 FREM2Q5SZK8 3169 aa16.5■□□□□ 0.23
CXCL12-206ENST00000395795 A0A1W2PQU0 124 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 PRNPP04156 253 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 CALB1P05937 261 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 TPM2P07951 284 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 PRLRP16471 622 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 NUDT1P36639 197 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 MAPKAPK2P49137 400 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 ZNF143P52747 638 aaPredicted RBP16.49■□□□□ 0.23
CXCL12-206ENST00000395795 CARD16Q5EG05 197 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 SEL1L3Q68CR1 1132 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 ACAD10Q6JQN1 1059 aa16.49■□□□□ 0.23
CXCL12-206ENST00000395795 RETSATQ6NUM9 610 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms