RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MAGEC1O60732 1142 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 EPHB2P29323 1055 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 MAT2AP31153 395 aaKnown RBP14.03□□□□□ -0.16
CXCL12-205ENST00000395794 L1CAMP32004 1257 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 CTSKP43235 329 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 KLHL30Q0D2K2 578 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 SCAPQ12770 1279 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 STAT4Q14765 748 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 POLD3Q15054 466 aaPredicted RBP14.03□□□□□ -0.16
CXCL12-205ENST00000395794 SETMARQ53H47 684 aaPredicted RBP14.03□□□□□ -0.16
CXCL12-205ENST00000395794 CARD16Q5EG05 197 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 ARSIQ5FYB1 569 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 MANEALQ5VSG8 457 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 AGBL4Q5VU57 503 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 NAPEPLDQ6IQ20 393 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 NEK5Q6P3R8 708 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 TRIM69Q86WT6 500 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 RYBPQ8N488 228 aaPredicted RBP14.03□□□□□ -0.16
CXCL12-205ENST00000395794 GRIN3AQ8TCU5 1115 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 FAM131CQ96AQ9 280 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 EPAS1Q99814 870 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 EDEM3Q9BZQ6 932 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 DONSONQ9NYP3 566 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 PCOLCE2Q9UKZ9 415 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 ADAMTS9Q9P2N4 1935 aa14.03□□□□□ -0.16
CXCL12-205ENST00000395794 PI4KAP42356 2102 aa14.02□□□□□ -0.16
CXCL12-205ENST00000395794 ZSCAN5CA6NGD5 496 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-205ENST00000395794 FAM72CH0Y354 149 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 H0Y8X5 98 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 TLR4O00206 839 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 LATO43561 262 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 CREB3O43889 395 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 PCDHGA12O60330 932 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 ZMPSTE24O75844 475 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 ACVRL1P37023 503 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 GRK6P43250 576 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 ARRB1P49407 418 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-205ENST00000395794 RPL7AP62424 266 aaKnown RBP14.02□□□□□ -0.17
CXCL12-205ENST00000395794 PPP2CBP62714 309 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 PPP2CAP67775 309 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 FAM193AP78312 1265 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 ARF5P84085 180 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 IQCB1Q15051 598 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 ST3GAL2Q16842 350 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 FAM72AQ5TYM5 149 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 FAM72DQ6L9T8 149 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 DPY19L3Q6ZPD9 716 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 ERN2Q76MJ5 926 aaKnown RBP14.02□□□□□ -0.17
CXCL12-205ENST00000395794 TMC6Q7Z403 805 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 NLRP14Q86W24 1093 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 FAM72BQ86X60 149 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 MFSD2AQ8NA29 543 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 CHST14Q8NCH0 376 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 ARHGEF2Q92974 986 aaKnown RBP14.02□□□□□ -0.17
CXCL12-205ENST00000395794 ISG20Q96AZ6 181 aaKnown RBP14.02□□□□□ -0.17
CXCL12-205ENST00000395794 MS4A3Q96HJ5 214 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 NAP1L5Q96NT1 182 aaPredicted RBP14.02□□□□□ -0.17
CXCL12-205ENST00000395794 HEPHQ9BQS7 1158 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 SCNM1Q9BWG6 230 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 HDAC8Q9BY41 377 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 HAUS4Q9H6D7 363 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 CATSPERBQ9H7T0 1116 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 EBF2Q9HAK2 575 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 AIPL1Q9NZN9 384 aa14.02□□□□□ -0.17
CXCL12-205ENST00000395794 CNOT1A5YKK6 2376 aaKnown RBP14.01□□□□□ -0.17
CXCL12-205ENST00000395794 TCRBV5S1A1TA0A578 114 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 PRAMEF26H0Y7S4 382 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 YKT6O15498 198 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 HYAL3O43820 417 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-205ENST00000395794 RNGTTO60942 597 aaKnown RBP14.01□□□□□ -0.17
CXCL12-205ENST00000395794 LEFTY1O75610 366 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 PCDH8O95206 1070 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 FTLP02792 175 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-205ENST00000395794 CTSLP07711 333 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 FTH1P19P0C7X4 201 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 GZMAP12544 262 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 SPINK2P20155 84 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 PSMA2P25787 234 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 OVGP1Q12889 678 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 MAMLD1Q13495 774 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 NR1I3Q14994 352 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 KCNT1Q5JUK3 1230 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 PPP1R15BQ5SWA1 713 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 PIP5KL1Q5T9C9 394 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 FBXL19Q6PCT2 694 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 DBX2Q6ZNG2 339 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 GLRX5Q86SX6 157 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 VPS36Q86VN1 386 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 OXR1Q8N573 874 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 TRIM11Q96F44 468 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 ELF4Q99607 663 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-205ENST00000395794 FUCA2Q9BTY2 467 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 TAS2R14Q9NYV8 317 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 FCF1Q9Y324 198 aaKnown RBP14.01□□□□□ -0.17
CXCL12-205ENST00000395794 NEUROG3Q9Y4Z2 214 aa14.01□□□□□ -0.17
CXCL12-205ENST00000395794 A0A1B0GTQ1 180 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 A0A1W2PQU0 124 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 A0A1W2PR77 199 aa14□□□□□ -0.17
CXCL12-205ENST00000395794 FGF10O15520 208 aaPredicted RBP14□□□□□ -0.17
CXCL12-205ENST00000395794 ATMINO43313 823 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms