RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 INVSQ9Y283 1065 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 PCDHA11Q9Y5I1 949 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 SGTAO43765 313 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 CXCR2P25025 360 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 MAPK8P45983 427 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 CASP7P55210 303 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 CEP68Q76N32 757 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 SELENOMQ8WWX9 145 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 MKL1Q969V6 931 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 SPRTNQ9H040 489 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 SNX6Q9UNH7 406 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 SIK3Q9Y2K2 1263 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 HIST1H2ABP04908 130 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 HTR1BP28222 390 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 HNRNPH1P31943 449 aaKnown RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 TNFSF9P41273 254 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 COPZ1P61923 177 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 PFKFB4Q16877 469 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 AFTPHQ6ULP2 937 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 RNF44Q7L0R7 432 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 HIST3H2AQ7L7L0 130 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 SIX5Q8N196 739 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 MOSPD2Q8NHP6 518 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 FAM45AQ8TCE6 357 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 HIST1H2ACQ93077 130 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 UBE2E3Q969T4 207 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 FERD3LQ96RJ6 166 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 SH3GL2Q99962 352 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 DCLRE1BQ9H816 532 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 TMPRSS4Q9NRS4 437 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 KIAA1210Q9ULL0 1709 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 KPNA5O15131 536 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 OR10H2O60403 315 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 CCNB1P14635 433 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 ZNF24P17028 368 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 HOXB8P17481 243 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 PPM1AP35813 382 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 CLK3P49761 638 aaKnown RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 CORO7P57737 925 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 IRF8Q02556 426 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 DGKZQ13574 1117 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 LYPLAL1Q5VWZ2 237 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 NEPROQ6NW34 567 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 ZCCHC23Q6ZST2 131 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 KCNK18Q7Z418 384 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 EFCAB3Q8N7B9 438 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 TBCDQ9BTW9 1192 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 FBXO6Q9NRD1 293 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 BTBD7Q9P203 1132 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 SAE1Q9UBE0 346 aaPredicted RBP10.52□□□□□ -0.73
COL4A6-203ENST00000394872 PSME2Q9UL46 239 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 GIT1Q9Y2X7 761 aa10.52□□□□□ -0.73
COL4A6-203ENST00000394872 KCNH1O95259 989 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 CAPN1P07384 714 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 HOXA10P31260 410 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 CRATP43155 626 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 CDK7P50613 346 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 TSNQ15631 228 aaKnown RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 FAM46CQ5VWP2 391 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 IZUMO2Q6UXV1 221 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SCAIQ8N9R8 606 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 RNF145Q96MT1 663 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 CDT1Q9H211 546 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 RIBC2Q9H4K1 309 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 DNAJC18Q9H819 358 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ENOPH1Q9UHY7 261 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SMIM31A0A1B0GVY4 71 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 NEK3P51956 506 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 FAM124AQ86V42 546 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 GPR152Q8TDT2 470 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 OXNAD1Q96HP4 312 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 MTMR9Q96QG7 549 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SLITRK2Q9H156 845 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ARHGEF3Q9NR81 526 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 TMCO1Q9UM00 188 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ZNF232Q9UNY5 417 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 PCDHAC2Q9Y5I4 1007 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 UBIAD1Q9Y5Z9 338 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 IQGAP1P46940 1657 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 A0A087X0B3 334 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 A0A0A0MRY4 1105 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 A0A0B4J269 797 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 UBOX5O94941 541 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 FTH1P02794 183 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ADRB2P07550 413 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SPATA31D3P0C874 917 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 MYL12AP19105 171 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 PPP3CAQ08209 521 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SPATA31D4Q6ZUB0 917 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 SPATA13Q96N96 652 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 APOL4Q9BPW4 351 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 FUT8Q9BYC5 575 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 DEPDC5O75140 1603 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 CLDN5O00501 218 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 ZNF143P52747 638 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 CAPSQ13938 189 aa10.51□□□□□ -0.73
COL4A6-203ENST00000394872 TRIM25Q14258 630 aaKnown RBP10.51□□□□□ -0.73
COL4A6-203ENST00000394872 KRT73Q86Y46 540 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms