RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 AP2B1P63010 937 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 KLF10Q13118 480 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 MPP3Q13368 585 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 PGM2L1Q6PCE3 622 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 CLEC14AQ86T13 490 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 SLC41A1Q8IVJ1 513 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 TMEM151AQ8N4L1 468 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 TDRD5Q8NAT2 981 aaKnown RBP13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 ZSCAN18Q8TBC5 510 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 ZNF483Q8TF39 744 aaPredicted RBP13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 SGF29Q96ES7 293 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 NUF2Q9BZD4 464 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 DNAI2Q9GZS0 605 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 NDFIP2Q9NV92 336 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 BFARQ9NZS9 450 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 FBXW11Q9UKB1 542 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 PCDHB12Q9Y5F1 795 aa13.72□□□□□ -0.21
GTF2F1-201ENST00000394456 F8W810 466 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 STX16-NPEPL1H3BU86 382 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 AURKAO14965 403 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 GPR182O15218 404 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 AOC2O75106 756 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 SMIM24O75264 130 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 LYNP07948 512 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 SERPINB8P50452 374 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 AQP4P55087 323 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 CDK18Q07002 472 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 TBL3Q12788 808 aaKnown RBP13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 POU6F1Q14863 301 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 TIGD5Q53EQ6 642 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 EPGNQ6UW88 154 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 TMEM209Q96SK2 561 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 C1orf21Q9H246 121 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 TASP1Q9H6P5 420 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 NMRAL1Q9HBL8 299 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 RNF186Q9NXI6 227 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 OR12D3Q9UGF7 316 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 MTF2Q9Y483 593 aaPredicted RBP13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 MX2P20592 715 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 SPRP35270 261 aaPredicted RBP13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 DSG1Q02413 1049 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 PPIDQ08752 370 aaKnown RBP13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 ASPHQ12797 758 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 C6orf163Q5TEZ5 329 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 RWDD4Q6NW29 188 aaKnown RBP13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 COLEC11Q9BWP8 271 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 CHST12Q9NRB3 414 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 ZDHHC2Q9UIJ5 367 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 PCDHGB4Q9UN71 923 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 NOD1Q9Y239 953 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 PCDHGB5Q9Y5G0 923 aa13.71□□□□□ -0.21
GTF2F1-201ENST00000394456 TTC3P53804 2025 aa13.71□□□□□ -0.22
GTF2F1-201ENST00000394456 TMEM88BA6NKF7 163 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 DFFAO00273 331 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 KLHL2O95198 593 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 GRK2P25098 689 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 GARSP41250 739 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 CHRNA4P43681 627 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 BRCC3P46736 316 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 NAGLUP54802 743 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 DLG1Q12959 904 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 LBRQ14739 615 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 CFAP157Q5JU67 520 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 TMCO4Q5TGY1 634 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 TAC4Q86UU9 113 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 CEP97Q8IW35 865 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 SCAMP5Q8TAC9 235 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 GBA3Q9H227 469 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 SUDS3Q9H7L9 328 aaPredicted RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 SCOCQ9UIL1 159 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 AK5Q9Y6K8 562 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 NEMP2A6NFY4 417 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 HHLA1C9JL84 531 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 CCNT2O60583 730 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 TOMM70O94826 608 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 AHSGP02765 367 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 RAG1P15918 1043 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 PKNOX1P55347 436 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 LPIN1Q14693 890 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 ARL13AQ5H913 290 aaPredicted RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 DHDDSQ86SQ9 333 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 SNX32Q86XE0 403 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 USP13Q92995 863 aaPredicted RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 CATSPER2Q96P56 530 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 ADAM2Q99965 735 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 C1QTNF1Q9BXJ1 281 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 ACE2Q9BYF1 805 aaPredicted RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 TMLHEQ9NVH6 421 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 SSX2IPQ9Y2D8 614 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 TSC2P49815 1807 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 H3BNX3 289 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 MSI1O43347 362 aaKnown RBP13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 B3GAT3O94766 335 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 PIGNO95427 931 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 SERPINB6P35237 376 aa13.7□□□□□ -0.22
GTF2F1-201ENST00000394456 GRIA4P48058 902 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms