RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 GUCA1BQ9UMX6 200 aa19.13■□□□□ 0.65
SNCB-202ENST00000393693 E5RJQ4 531 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 DDX3XO00571 662 aaKnown RBP eCLIP19.12■□□□□ 0.65
SNCB-202ENST00000393693 SART1O43290 800 aaKnown RBP19.12■□□□□ 0.65
SNCB-202ENST00000393693 ADH1BP00325 375 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 IGLV3-25P01717 112 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 H2AFZP0C0S5 128 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 MAT2AP31153 395 aaKnown RBP19.12■□□□□ 0.65
SNCB-202ENST00000393693 ARHGAP25P42331 645 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 ACADVLP49748 655 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 GNG11P61952 73 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 CDR2Q01850 454 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 PPP1R2P3Q6NXS1 205 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 H2AFVQ71UI9 128 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 SLC47A2Q86VL8 602 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 SPATS2Q86XZ4 545 aaKnown RBP19.12■□□□□ 0.65
SNCB-202ENST00000393693 PIP4K2CQ8TBX8 421 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 BTN2A3PQ96KV6 586 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 PDCL3Q9H2J4 239 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 SARDHQ9UL12 918 aa19.12■□□□□ 0.65
SNCB-202ENST00000393693 TP53BP1Q12888 1972 aaPredicted RBP19.12■□□□□ 0.65
SNCB-202ENST00000393693 E9PAM4 449 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 F5H5T6 163 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 RTN2O75298 545 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 ITPKBP27987 946 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 ACADSBP45954 432 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 TARDBPQ13148 414 aaKnown RBP eCLIP19.11■□□□□ 0.65
SNCB-202ENST00000393693 EIF4EBP2Q13542 120 aaPredicted RBP19.11■□□□□ 0.65
SNCB-202ENST00000393693 ELAVL3Q14576 367 aaKnown RBP19.11■□□□□ 0.65
SNCB-202ENST00000393693 BEND5Q7L4P6 421 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 NOP9Q86U38 636 aaKnown RBP19.11■□□□□ 0.65
SNCB-202ENST00000393693 FRS2Q8WU20 508 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 TSC1Q92574 1164 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 PRMT1Q99873 361 aaKnown RBP19.11■□□□□ 0.65
SNCB-202ENST00000393693 POPDC2Q9HBU9 364 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 NOCTQ9UK39 431 aaKnown RBP19.11■□□□□ 0.65
SNCB-202ENST00000393693 PAXBP1Q9Y5B6 917 aa19.11■□□□□ 0.65
SNCB-202ENST00000393693 COL5A1P20908 1838 aaPredicted RBP19.11■□□□□ 0.65
SNCB-202ENST00000393693 SYNJ2BP-COX16A0A087WUM0 186 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 KCNU1A8MYU2 1149 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 LATO43561 262 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 TLX3O43711 291 aaPredicted RBP19.1■□□□□ 0.65
SNCB-202ENST00000393693 GZMAP12544 262 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 GNA15P30679 374 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 NNMTP40261 264 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 ARRB1P49407 418 aaPredicted RBP19.1■□□□□ 0.65
SNCB-202ENST00000393693 YWHAZP63104 245 aaKnown RBP19.1■□□□□ 0.65
SNCB-202ENST00000393693 SEMG2Q02383 582 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 IFI16Q16666 785 aaKnown RBP19.1■□□□□ 0.65
SNCB-202ENST00000393693 POM121L1PQ3SYA9 428 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 SLC45A4Q5BKX6 768 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 HES3Q5TGS1 186 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 TAF3Q5VWG9 929 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 NAPEPLDQ6IQ20 393 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 CXorf57Q6NSI4 855 aaKnown RBP19.1■□□□□ 0.65
SNCB-202ENST00000393693 TRIM72Q6ZMU5 477 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 TMEM110Q86TL2 294 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 RNF10Q8N5U6 811 aaKnown RBP19.1■□□□□ 0.65
SNCB-202ENST00000393693 ATP6V0D2Q8N8Y2 350 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 OR52K2Q8NGK3 314 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 STK32AQ8WU08 396 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 SLC20A1Q8WUM9 679 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 ZNF606Q8WXB4 792 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 ZNF592Q92610 1267 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 COX16Q9P0S2 106 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 NENFQ9UMX5 172 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 CA5BQ9Y2D0 317 aa19.1■□□□□ 0.65
SNCB-202ENST00000393693 BTNL10A8MVZ5 291 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 YKT6O15498 198 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 C1SP09871 688 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 CASQ1P31415 396 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 HNF1BP35680 557 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 ABCG1P45844 678 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 RXRGP48443 463 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 IRAK1P51617 712 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 CENPCQ03188 943 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 ZNF569Q5MCW4 686 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 C6orf118Q5T5N4 469 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 FBXL22Q6P050 247 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 FBXL19Q6PCT2 694 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 SYT10Q6XYQ8 523 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 KANSL1Q7Z3B3 1105 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 PRPF39Q86UA1 669 aaKnown RBP19.09■□□□□ 0.65
SNCB-202ENST00000393693 DEFB106AQ8N104 65 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 FAM131CQ96AQ9 280 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 NXPE2Q96DL1 559 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 ALG14Q96F25 216 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 ERVMER34-1Q9H9K5 563 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.09■□□□□ 0.65
SNCB-202ENST00000393693 DNAI1Q9UI46 699 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 AK5Q9Y6K8 562 aa19.09■□□□□ 0.65
SNCB-202ENST00000393693 EIF4E1BA6NMX2 242 aaKnown RBP19.08■□□□□ 0.64
SNCB-202ENST00000393693 THAP12O43422 761 aa19.08■□□□□ 0.64
SNCB-202ENST00000393693 MED7O43513 233 aa19.08■□□□□ 0.64
SNCB-202ENST00000393693 SDC3O75056 442 aa19.08■□□□□ 0.64
SNCB-202ENST00000393693 MMEP08473 750 aa19.08■□□□□ 0.64
SNCB-202ENST00000393693 CHRNB2P17787 502 aa19.08■□□□□ 0.64
SNCB-202ENST00000393693 GGCXP38435 758 aa19.08■□□□□ 0.64
SNCB-202ENST00000393693 PLK1P53350 603 aa19.08■□□□□ 0.64
SNCB-202ENST00000393693 SULT2A1Q06520 285 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms