RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 FSD1LQ9BXM9 530 aa8.79□□□□□ -1
TDP1-203ENST00000393454 PPCSQ9HAB8 311 aa8.79□□□□□ -1
TDP1-203ENST00000393454 ATP13A1Q9HD20 1204 aa8.79□□□□□ -1
TDP1-203ENST00000393454 CASS4Q9NQ75 786 aa8.79□□□□□ -1
TDP1-203ENST00000393454 LGALS13Q9UHV8 139 aa8.79□□□□□ -1
TDP1-203ENST00000393454 STOML2Q9UJZ1 356 aa8.79□□□□□ -1
TDP1-203ENST00000393454 ZNF510Q9Y2H8 683 aa8.79□□□□□ -1
TDP1-203ENST00000393454 PDE4DIPQ5VU43 2346 aa8.79□□□□□ -1
TDP1-203ENST00000393454 ILVBLA1L0T0 632 aa8.79□□□□□ -1
TDP1-203ENST00000393454 TTC24A2A3L6 582 aaPredicted RBP8.79□□□□□ -1
TDP1-203ENST00000393454 AP3B1O00203 1094 aa8.79□□□□□ -1
TDP1-203ENST00000393454 CBX4O00257 560 aa8.79□□□□□ -1
TDP1-203ENST00000393454 LEFTY2O00292 366 aa8.79□□□□□ -1
TDP1-203ENST00000393454 CACNG3O60359 315 aa8.79□□□□□ -1
TDP1-203ENST00000393454 INHBAP08476 426 aa8.79□□□□□ -1
TDP1-203ENST00000393454 HNRNPA1P09651 372 aaKnown RBP eCLIP8.79□□□□□ -1
TDP1-203ENST00000393454 HOXD11P31277 338 aaPredicted RBP8.79□□□□□ -1
TDP1-203ENST00000393454 CD86P42081 329 aa8.79□□□□□ -1
TDP1-203ENST00000393454 IFNAR2P48551 515 aa8.79□□□□□ -1
TDP1-203ENST00000393454 NPY2RP49146 381 aa8.79□□□□□ -1
TDP1-203ENST00000393454 GNGT1P63211 74 aa8.79□□□□□ -1
TDP1-203ENST00000393454 NTHL1P78549 312 aa8.79□□□□□ -1
TDP1-203ENST00000393454 SKOR1P84550 965 aa8.79□□□□□ -1
TDP1-203ENST00000393454 GUCY1A3Q02108 690 aa8.79□□□□□ -1
TDP1-203ENST00000393454 CDH17Q12864 832 aa8.79□□□□□ -1
TDP1-203ENST00000393454 CERCAMQ5T4B2 595 aa8.79□□□□□ -1
TDP1-203ENST00000393454 TMCO4Q5TGY1 634 aa8.79□□□□□ -1
TDP1-203ENST00000393454 ELMSAN1Q6PJG2 1045 aa8.79□□□□□ -1
TDP1-203ENST00000393454 CES3Q6UWW8 571 aa8.79□□□□□ -1
TDP1-203ENST00000393454 Q6ZNB5 142 aa8.79□□□□□ -1
TDP1-203ENST00000393454 TPGS1Q6ZTW0 290 aa8.79□□□□□ -1
TDP1-203ENST00000393454 HTR3DQ70Z44 454 aa8.79□□□□□ -1
TDP1-203ENST00000393454 GRASPQ7Z6J2 395 aaPredicted RBP8.79□□□□□ -1
TDP1-203ENST00000393454 SETD3Q86TU7 594 aaPredicted RBP8.79□□□□□ -1
TDP1-203ENST00000393454 TDRPQ86YL5 185 aa8.79□□□□□ -1
TDP1-203ENST00000393454 CCNJLQ8IV13 435 aa8.79□□□□□ -1
TDP1-203ENST00000393454 BBS7Q8IWZ6 715 aa8.79□□□□□ -1
TDP1-203ENST00000393454 SRRM1Q8IYB3 904 aaKnown RBP8.79□□□□□ -1
TDP1-203ENST00000393454 DDI1Q8WTU0 396 aa8.79□□□□□ -1
TDP1-203ENST00000393454 FATE1Q969F0 183 aa8.79□□□□□ -1
TDP1-203ENST00000393454 ABHD8Q96I13 439 aa8.79□□□□□ -1
TDP1-203ENST00000393454 NAT9Q9BTE0 207 aa8.79□□□□□ -1
TDP1-203ENST00000393454 SLC25A51Q9H1U9 297 aa8.79□□□□□ -1
TDP1-203ENST00000393454 NKX2-4Q9H2Z4 354 aa8.79□□□□□ -1
TDP1-203ENST00000393454 TLE6Q9H808 572 aa8.79□□□□□ -1
TDP1-203ENST00000393454 PIDD1Q9HB75 910 aa8.79□□□□□ -1
TDP1-203ENST00000393454 KCNK9Q9NPC2 374 aa8.79□□□□□ -1
TDP1-203ENST00000393454 UBA2Q9UBT2 640 aaPredicted RBP8.79□□□□□ -1
TDP1-203ENST00000393454 DPP7Q9UHL4 492 aa8.79□□□□□ -1
TDP1-203ENST00000393454 MSRAQ9UJ68 235 aa8.79□□□□□ -1
TDP1-203ENST00000393454 CCDC195A0A1B0GUA6 201 aa8.78□□□□□ -1
TDP1-203ENST00000393454 KDELR3O43731 214 aa8.78□□□□□ -1
TDP1-203ENST00000393454 GREM1O60565 184 aa8.78□□□□□ -1
TDP1-203ENST00000393454 C1RP00736 705 aa8.78□□□□□ -1
TDP1-203ENST00000393454 POLBP06746 335 aa8.78□□□□□ -1
TDP1-203ENST00000393454 PFKLP17858 780 aa8.78□□□□□ -1
TDP1-203ENST00000393454 GLDCP23378 1020 aa8.78□□□□□ -1
TDP1-203ENST00000393454 DDX6P26196 483 aaKnown RBP eCLIP8.78□□□□□ -1
TDP1-203ENST00000393454 DSC2Q02487 901 aa8.78□□□□□ -1
TDP1-203ENST00000393454 NR1H3Q13133 447 aa8.78□□□□□ -1
TDP1-203ENST00000393454 MPP3Q13368 585 aa8.78□□□□□ -1
TDP1-203ENST00000393454 CDH18Q13634 790 aa8.78□□□□□ -1
TDP1-203ENST00000393454 TNFAIP8L3Q5GJ75 292 aa8.78□□□□□ -1
TDP1-203ENST00000393454 PPP2R2DQ66LE6 453 aa8.78□□□□□ -1
TDP1-203ENST00000393454 TRMT10BQ6PF06 316 aaKnown RBP8.78□□□□□ -1
TDP1-203ENST00000393454 ADGRD2Q7Z7M1 963 aa8.78□□□□□ -1
TDP1-203ENST00000393454 CCDC117Q8IWD4 279 aaPredicted RBP8.78□□□□□ -1
TDP1-203ENST00000393454 CMTM8Q8IZV2 173 aa8.78□□□□□ -1
TDP1-203ENST00000393454 BBS5Q8N3I7 341 aa8.78□□□□□ -1
TDP1-203ENST00000393454 SLC25A41Q8N5S1 370 aa8.78□□□□□ -1
TDP1-203ENST00000393454 TEX26Q8N6G2 289 aa8.78□□□□□ -1
TDP1-203ENST00000393454 TDRD5Q8NAT2 981 aaKnown RBP8.78□□□□□ -1
TDP1-203ENST00000393454 MDM1Q8TC05 714 aa8.78□□□□□ -1
TDP1-203ENST00000393454 SH3RF2Q8TEC5 729 aa8.78□□□□□ -1
TDP1-203ENST00000393454 PBX4Q9BYU1 374 aa8.78□□□□□ -1
TDP1-203ENST00000393454 TASP1Q9H6P5 420 aa8.78□□□□□ -1
TDP1-203ENST00000393454 CNOT10Q9H9A5 744 aaKnown RBP8.78□□□□□ -1
TDP1-203ENST00000393454 FETUBQ9UGM5 382 aa8.78□□□□□ -1
TDP1-203ENST00000393454 TBC1D30Q9Y2I9 924 aa8.78□□□□□ -1
TDP1-203ENST00000393454 HCFC2Q9Y5Z7 792 aa8.78□□□□□ -1
TDP1-203ENST00000393454 ACTL7AQ9Y615 435 aa8.78□□□□□ -1
TDP1-203ENST00000393454 RPS6KL1Q9Y6S9 549 aa8.78□□□□□ -1
TDP1-203ENST00000393454 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.77□□□□□ -1
TDP1-203ENST00000393454 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.77□□□□□ -1
TDP1-203ENST00000393454 LUC7L3O95232 432 aaKnown RBP8.77□□□□□ -1
TDP1-203ENST00000393454 HOXD9P28356 352 aaPredicted RBP8.77□□□□□ -1
TDP1-203ENST00000393454 HOXA9P31269 272 aa8.77□□□□□ -1
TDP1-203ENST00000393454 MDH1P40925 334 aaKnown RBP8.77□□□□□ -1
TDP1-203ENST00000393454 EPHA5P54756 1037 aa8.77□□□□□ -1
TDP1-203ENST00000393454 WNT3AP56704 352 aa8.77□□□□□ -1
TDP1-203ENST00000393454 NIPAL4Q0D2K0 466 aa8.77□□□□□ -1
TDP1-203ENST00000393454 CRYMQ14894 314 aa8.77□□□□□ -1
TDP1-203ENST00000393454 SMAD1Q15797 465 aaKnown RBP8.77□□□□□ -1
TDP1-203ENST00000393454 SLC5A9Q2M3M2 681 aa8.77□□□□□ -1
TDP1-203ENST00000393454 FSCBQ5H9T9 825 aa8.77□□□□□ -1
TDP1-203ENST00000393454 EMC10Q5UCC4 262 aa8.77□□□□□ -1
TDP1-203ENST00000393454 CXorf57Q6NSI4 855 aaKnown RBP8.77□□□□□ -1
TDP1-203ENST00000393454 ADGRD1Q6QNK2 874 aa8.77□□□□□ -1
TDP1-203ENST00000393454 LRRC6Q86X45 466 aa8.77□□□□□ -1
TDP1-203ENST00000393454 MFN1Q8IWA4 741 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms