RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 MYLKQ15746 1914 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 DPPA5A6NC42 116 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 E9PBE3 544 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 TK2O00142 265 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 GPR182O15218 404 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 KLHL41O60662 606 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 CABYRO75952 493 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 ANXA9O76027 345 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 BAG2O95816 211 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 GLDCP23378 1020 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 HOXC13P31276 330 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 HTR7P34969 479 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 MGAT3Q09327 533 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 CUL3Q13618 768 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 PPP2R5DQ14738 602 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 TAF1CQ15572 869 aaPredicted RBP12.5□□□□□ -0.41
RFC5-201ENST00000392542 UGP2Q16851 508 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
RFC5-201ENST00000392542 TMEM154Q6P9G4 183 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 FRMD7Q6ZUT3 714 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 CNTN4Q8IWV2 1026 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 TMEM151AQ8N4L1 468 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.5□□□□□ -0.41
RFC5-201ENST00000392542 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 HAPLN3Q96S86 360 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 DRC3Q9H069 523 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 TCF7L2Q9NQB0 619 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 CDH22Q9UJ99 828 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 PCNTO95613 3336 aa12.5□□□□□ -0.41
RFC5-201ENST00000392542 FGF10O15520 208 aaPredicted RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 PHGDHO43175 533 aaKnown RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 DUSP11O75319 330 aaKnown RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 B3GAT3O94766 335 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 MT-CYBP00156 380 aaPredicted RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 AHSGP02765 367 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 SBK3P0C264 359 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 SAT1P21673 171 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 MPSTP25325 297 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 DNAJB1P25685 340 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 GABRB3P28472 473 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 HK2P52789 917 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 EPHB1P54762 984 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 SLC12A1Q13621 1099 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 MANEALQ5VSG8 457 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 CD300LGQ6UXG3 332 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 APLFQ8IW19 511 aaPredicted RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 CCDC117Q8IWD4 279 aaPredicted RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 DEFB107AQ8IZN7 70 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 LZTR1Q8N653 840 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 PPHLN1Q8NEY8 458 aaKnown RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 IPMKQ8NFU5 416 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 JADE3Q92613 823 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 UPF1Q92900 1129 aaKnown RBP eCLIP12.49□□□□□ -0.41
RFC5-201ENST00000392542 SCYL1Q96KG9 808 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 OR52B2Q96RD2 323 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 RTKNQ9BST9 563 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 CATSPERBQ9H7T0 1116 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 AGO3Q9H9G7 860 aaKnown RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 CYP4F11Q9HBI6 524 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 DSEQ9UL01 958 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 RUVBL2Q9Y230 463 aaKnown RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 LOC100653049A0A140TA62 436 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 M0QZQ0 153 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 MATN2O00339 956 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 MATN3O15232 486 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 MAFKO60675 156 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 KRT34O76011 436 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 PDE5AO76074 875 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 POMCP01189 267 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 CHRNGP07510 517 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 SLC35E2BP0CK96 405 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 COL6A2P12110 1019 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 GRIA4P48058 902 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 POLD2P49005 469 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 GEMP55040 296 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 CCNIQ14094 377 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 POU6F1Q14863 301 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 GNASQ5JWF2 1037 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 BTBD8Q5XKL5 378 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 DENND5AQ6IQ26 1287 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 LRRTM3Q86VH5 581 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 SLC41A1Q8IVJ1 513 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 OR10T2Q8NGX3 314 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 SCAMP5Q8TAC9 235 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 STYXQ8WUJ0 223 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 KCTD4Q8WVF5 259 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 ZNF419Q96HQ0 510 aaPredicted RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 TMEM209Q96SK2 561 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 SLC39A8Q9C0K1 460 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 MRM3Q9HC36 420 aaKnown RBP12.49□□□□□ -0.41
RFC5-201ENST00000392542 ABCC13Q9NSE7 274 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 ARHGAP26Q9UNA1 814 aa12.49□□□□□ -0.41
RFC5-201ENST00000392542 HDAC3O15379 428 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 ZNF623O75123 536 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 PAGE1O75459 146 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 DDHD2O94830 711 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 CRABP2P29373 138 aa12.48□□□□□ -0.41
RFC5-201ENST00000392542 AVPR1AP37288 418 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms